| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2877 |
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| Symbol | panF |
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| ID | 6117192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3518618 |
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| End bp | 3520063 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634423 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_001761247 |
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| Protein GI | 170727221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00510653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAATC TAATCCCTGT ACTTATCTAC TTGGTACTAA GTTTGGTTAT CACTCGATGG
TGGAGTAGTC GTCAAGCCGA TGTTGGCCAA CTACATCAAG ATAAAGCTAA GCGTTTTTTC
ATCGGTGGAT TCTTCCTTAA TGGCCCGATG CTAGCCCTAA CCTTGGTGGC GACTTATACC
AGCGCAAGCT CCTTTATTGG TGGGCCAGGC GCGGCATATC AAATGGGGCT TGGTTGGGTG
TGGTTAGCCT TGATACAGGT GCCTGTGGCC ATATTAACCT TAGGGGTGTT AGGTCCTAAG
TTTTTAGCAA TGCGTAGTGC AGAGCATACA ACTTTAATCG AGTGGCTCGA CAGTCGCTAC
CAACATCCAT GGTTAAGCAG CTTGGCTATT GTGAGCTTAG TTATGGGGTT TATTGCCATG
ATAGCGGTGC AATTTATTGG TGGAGCTCGC TTATTTTCTG GCGTGAGCGG TATAAGTTAT
GAGATAGGGT TAGGCCTATT TGTGCTAACG GTGCTGGGTT ATACCTTAAC TGGTGGCTTT
AGGGCGGTGG TGTTAACCGA TGTCCTTCAA GGGGGGGTGA TGCTTGCCGG ATTAATTTTA
CTCTTTGGCT CAATTTTGTC TCAGGGGACG CTGCCTGAGT TGATGGAGAA AGTGACGGCA
TATTCACCGC AGATGCTAAG CCCTCATGGA GTGAATGACT ATCTCGGTTG GCCTATGATG
CTCTCATTTT GGGTATTGAT CTGTTTTGGT ACCATGGGGC TTCCCCATAC TTTGGTGCGC
TTGTTAGCGG TTAAAGATAG TCGCTCTTTG ATGCGTGGTA TGGTGTGGGG GACGATAATC
TGCTTTTTGA TGACCTTGCT GCCACACTTG TGCGGTGTAT TTGGCCGAGC ACTTTATCCT
GAGTTAACAG TGCCAGATGA GATAATGCCT AGATTGATCT CTGGCTTGTT TCATCCATTT
TGGGCTGGTG TGCTGCTTGC TGCGCCCATT GCAGCTGTAA TGTCTTCGGT AGACTCTATG
CTGCTTCAAT CTGCTGTAAG CTTAATTCGA GATGGTGTGA TGAAACAGTA TCCGAGATTG
AGCGCCACTA GGCAGATTAA GCTAACGCGA GTTGCCATGT TGCTAATAAC GGTATTGGCG
ACCTATTGGG CGATTGAGCC ACCAGAGATG ATAGTGTGGA TCAATTTAGC CGCGTTTGGG
GCGCTGCAGG CTGTATTTCT ATGGCCCATT ATTGCAGGGG TGTTTTGGAA AAACATCAGT
GGGAATAGCG CATTTGGTGC CATGGGAGCA GGGTTGATAA GCTATCTTGT TTTCCAGCTT
AACGCTCCAC TTGTGTGGAA GATCCACCCG ATAGTTCCCG CTTTAACCAT CTCTTTGTTG
GTTATGTTAC TGATCCACGC TCTCAGCCCT CAGGCGAATG TTAAGGCATT GGACGGTGAA
TCTTAA
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| Protein sequence | MTNLIPVLIY LVLSLVITRW WSSRQADVGQ LHQDKAKRFF IGGFFLNGPM LALTLVATYT
SASSFIGGPG AAYQMGLGWV WLALIQVPVA ILTLGVLGPK FLAMRSAEHT TLIEWLDSRY
QHPWLSSLAI VSLVMGFIAM IAVQFIGGAR LFSGVSGISY EIGLGLFVLT VLGYTLTGGF
RAVVLTDVLQ GGVMLAGLIL LFGSILSQGT LPELMEKVTA YSPQMLSPHG VNDYLGWPMM
LSFWVLICFG TMGLPHTLVR LLAVKDSRSL MRGMVWGTII CFLMTLLPHL CGVFGRALYP
ELTVPDEIMP RLISGLFHPF WAGVLLAAPI AAVMSSVDSM LLQSAVSLIR DGVMKQYPRL
SATRQIKLTR VAMLLITVLA TYWAIEPPEM IVWINLAAFG ALQAVFLWPI IAGVFWKNIS
GNSAFGAMGA GLISYLVFQL NAPLVWKIHP IVPALTISLL VMLLIHALSP QANVKALDGE
S
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