| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2864 |
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| Symbol | |
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| ID | 6117179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3499736 |
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| End bp | 3501100 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634410 |
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| Product | NADH-quinone oxidoreductase, F subunit |
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| Protein accession | YP_001761234 |
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| Protein GI | 170727208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0700873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00675695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCAAA CCTTACCCCA TAACCCGCTA ACTCGCTTTA TCACAGATAA TGAGAATTGC
TGGTCAATTG AGCAATATCA AAACCACGGT GGCTACCAAG GTTTTCGTAA GTCTTTAACC
CAGAGTCAAG AACAACTCCT TGATACTTTA AAGGAGTCTA ACCTTAGAGG CCGTGGCGGA
GCCGGCTTCC CCACAGGGCT AAAATGGAGT TTTGTGCCTC GAGGCGATGA CGCTCCCTCC
CCCCGTTATC TCATCGTTAA TGCCGATGAA ATGGAGCCAG GTACCTTTAA AGACCGAATG
CTTATGGAGA AAACCCCTCA CCAGATCATT GAAGGCTTGC TGATCGGTGC ACAGACTTTA
GGGGCATCTA TTGGGTATGT CTTTCTTCGT GGGGATTATT ATCTAGCAGA GGAGCGCATG
ACTAAAGCAC TTCAAGAGTG CAGAGATGCC AACCTATTAG GGAAAAATAT ACTGGGAAGC
GGATTAGATT TTGATATTCA CCTCCACACC AGCGCAGGGC GCTATATCTG CGGGGAGGAG
ACCGCCTTAA TCAACTCCAT GGAGGGGAAA CGCGCCAACC CTAGGGCTAA ACCTCCCTTT
CCGCAAGTAG CGGGCCTATG GGGAAAGCCC ACCATAGTCA ACAATGTTGA GACCTTCTGT
AATTTGCCCC ATATCATCAA TTTCGGCCCC ATATGGTTTA AAGAGCTGGG CCTTAACGAT
GATGCGGGAA CTAAAATATT TGGTGTTAGT GGCAGAGTGA AACGACCAGG TCTTTGGGAG
TTACCAATGG GCACACCGAT CAGGGAGATA ATAGAGCAAC ACGCAGGTGG CATGTGTGAT
GGATACACAC TTAAAGGCTT CCTCCCCGGT GGCGGCTCCA CTGACTTTTT AGTGACAGAG
CATCTGGACA TTCCAATGGA TTACGACACC ATTGGCAAAC AGGGTAGCCG AATGGGAACA
GGTACCATCA TCATATTGGA TGACAGATAC TGCCCAGTGG CTATGGTGCT CAACCTTATT
AAATTCTTTG CTCAAGAGTC CTGCGGTTGG TGTACTCCTT GTCGTGACGG CTTGCCTTGG
GCTCAGGTCT TACTTGAGAA AATTGAGCGT GGAGAGGGGG AGCCAGAGGA TATCACTCAA
CTTGAAGAGC TATGCCGCTT TGCCGCCCCT GGCAATACAT TTTGTGCATT AGCCCCAGGA
GCTGTCGAGC CCCTACAGAG CGCGCTGAAA TACTTTAGAG AAGATTTCGA AGCTCACATT
AGCCAAGCTT GCTGCCCTTT TCATGATAAA AAAAGACAAG GTATTGATGA GATAGGCACT
CCTTGTATCA AAGGTTCTGG GGGTGACAAA TATGAGCAGC TCTAA
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| Protein sequence | MNQTLPHNPL TRFITDNENC WSIEQYQNHG GYQGFRKSLT QSQEQLLDTL KESNLRGRGG
AGFPTGLKWS FVPRGDDAPS PRYLIVNADE MEPGTFKDRM LMEKTPHQII EGLLIGAQTL
GASIGYVFLR GDYYLAEERM TKALQECRDA NLLGKNILGS GLDFDIHLHT SAGRYICGEE
TALINSMEGK RANPRAKPPF PQVAGLWGKP TIVNNVETFC NLPHIINFGP IWFKELGLND
DAGTKIFGVS GRVKRPGLWE LPMGTPIREI IEQHAGGMCD GYTLKGFLPG GGSTDFLVTE
HLDIPMDYDT IGKQGSRMGT GTIIILDDRY CPVAMVLNLI KFFAQESCGW CTPCRDGLPW
AQVLLEKIER GEGEPEDITQ LEELCRFAAP GNTFCALAPG AVEPLQSALK YFREDFEAHI
SQACCPFHDK KRQGIDEIGT PCIKGSGGDK YEQL
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