| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2822 |
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| Symbol | |
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| ID | 6117137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3449381 |
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| End bp | 3450295 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634368 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001761192 |
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| Protein GI | 170727166 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0197523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.589984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA ATTGGCAAGG TGTGTTCCCA GCAATCTCAA CCCAGTTCAA CGATGATGGT
TCGATTAACT ATGAATCGAA TGCCCGTATG CTGGAAGACC TTATTAATGA TGGGATCGAT
GGCATCATCG CACTCGGTAC CATAGGAGAA AACGCCTCTT TAAGCCCAAC TGAGAAACGT
GAGTTTATTA AACACACAGT AGAAACTGTT AAAGGCCGTA TTCTCGTTTT ATCCGGTTGT
ACCGAAAACA CAGCTGAGCA AGCCGCCAAG TATGCACAAG ATGTGGCAGA GCTCGGTGTT
GATGGTTTGA TGTTACTGCC CGCTATGGTA TATCGCGGTA CCGACCGTGA AGTGGTAGCC
CACTACCAAC ACGTTGCTCG TGCGACTAAG CTTCCCATCA TGATCTACAA CAACCCTGTC
AGCTACGGCG TTGATATCAA CTTAGAGATG ACGGCTATTC TTGCTCAAGA GGAGAATATT
GTCGCGATTA AAGAGTCCAC CACAGATACC CGTCGCCTAA CAGAGCTACA ATCTCAATTT
GGCGATCGCT TTAACATTCT ATGTGGTGTC GATGACATCG CACTCGAAAG CATCTTCTTA
GGCGCTACGG GTTGGATATC TGGCCTTACC AATGTATTCC CACGTGAGTC TGTCACCCTA
TTTAAGCTGG CACGTGCTGG TCGTATTGAA GAAGCACGCG AAATCTACCG TTGGTTTATG
CCGCTGTTAC GTCTCGATAC TATTCCCACT TTGGTTCAAT GCATCAAACT GGCTGAACAG
ATCGTTGGCC GCGGCAGCGA AAATGTTCGT ATGCCACGCA TGAGCTTAAT CGGTGACGAA
CGTGCTTATG TAGAGAGTGT CATTAAAGAG GCGATGGAGA CACGAATCGA TCTCAATAAA
TACAACCTAG ATTAA
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| Protein sequence | MKVNWQGVFP AISTQFNDDG SINYESNARM LEDLINDGID GIIALGTIGE NASLSPTEKR
EFIKHTVETV KGRILVLSGC TENTAEQAAK YAQDVAELGV DGLMLLPAMV YRGTDREVVA
HYQHVARATK LPIMIYNNPV SYGVDINLEM TAILAQEENI VAIKESTTDT RRLTELQSQF
GDRFNILCGV DDIALESIFL GATGWISGLT NVFPRESVTL FKLARAGRIE EAREIYRWFM
PLLRLDTIPT LVQCIKLAEQ IVGRGSENVR MPRMSLIGDE RAYVESVIKE AMETRIDLNK
YNLD
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