| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2795 |
|---|
| Symbol | |
|---|
| ID | 6117104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3414531 |
|---|
| End bp | 3415358 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641634335 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001761165 |
|---|
| Protein GI | 170727139 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAC CAGAACATAT TGAATATTGG CACAACCCTG TATTACCTGA GATAGAGTTA
AGCCGCGCCA AGTTAACGCA ATTTGAGTTT CAAAAACATA TTCATCTTGA TTATCATGTT
GGCGTCGTCT CCCATGGTTG CCAACAATAT TGCCATAAAG GTAATACATA TCTACTCACA
CCAGGCTCTA TCTCAACATT AAATCCAGAT GAAACTCATA ATGGTCAAAG TAGAAACGCT
GAGGGCTATG AAGCTCACGT GCTCTCAATC CCTGCACACT ATGTAAAACA GGTAAGTGAC
GAGTTAAACC AAGGAGAGCT ATTTTTTAAC TCGCCTCTTA TCGACACTCC TCGCCTTCAA
TTTGCATTTC TTCAACTTCA TCAGATGTTA ACCTCTACCC AGCAATTCAG TAGCTTAGAG
ATTGAAACCA GTATGATGGC ATTTACAACG GAGCTATTTT CAAAACACAG TGAACTGCAG
CCAGTTAAAC AGAACATAAC CACAGGACTA TCCCATCAAC AAATCTGTCA AATCCGTGAA
CTATTTCATG ATGATTTAAG CCATACGTTC CAGCTAGAAA CCTTAGCCGT TAAATTTAAC
TTGAGTAAAT TTCAATTCTT GAGAGCCTTT AAGAAAACGG TAGGCATGAC TCCCCACGCT
TACCTGAAAA GAGTACGGTT GGAGCATGCT AAGAAGGCCA TCATCAATGG AGGAGCTCTA
TCCGATATCG CCAATCAAGT TGGTTTTTTC GATCAAAGCC ACCTTAATAA AGCATTCAAG
CATGCCTATT TAATTACCCC TGCCCATTTT CAACGTCGCG TACTTTAA
|
|---|
| Protein sequence | MMTPEHIEYW HNPVLPEIEL SRAKLTQFEF QKHIHLDYHV GVVSHGCQQY CHKGNTYLLT
PGSISTLNPD ETHNGQSRNA EGYEAHVLSI PAHYVKQVSD ELNQGELFFN SPLIDTPRLQ
FAFLQLHQML TSTQQFSSLE IETSMMAFTT ELFSKHSELQ PVKQNITTGL SHQQICQIRE
LFHDDLSHTF QLETLAVKFN LSKFQFLRAF KKTVGMTPHA YLKRVRLEHA KKAIINGGAL
SDIANQVGFF DQSHLNKAFK HAYLITPAHF QRRVL
|
|---|
| |