Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2775 |
Symbol | |
ID | 6117083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3391632 |
End bp | 3392348 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634315 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001761146 |
Protein GI | 170727120 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.88847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.739494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACTG TGATGATAAC AGGCGCCTCC TCTGGGATAG GTAAAGCCCT AGCGCAACAT TATGACCAGT TAGGTTGGCA AGTATTGGCG TGTGGTCGCG ATCAGAATCG GTTAATGGAG GTTGCATCAT CTGCTCAAAC GATACAAACC TTAGCGTTCG ATCTTACAGA TAAAAAGCAA GTTGAGCAGA TCTCTTCTGA TTTGCCTGCG TTAGATATGC TTGTCTTTAA TGCTGGGGAT TGCCGTTATA TCGACAACGC GATGGATTTT GATGCTGAAA GTTTTGAAAC CATTATTCAA ACGAATCTTA TCTCAGTGGC TTATGGTCTT AAGGCTTGGC TTAAACATAT GAAAAAAGGG GGGAGAGTTG TGTTTGTTAG CTCAAGTGCC GAACTGTTAG CTCTGCCTAG GGCTGAGGCT TACGGTGCAT CTAAGGCTGC ACTATCTTAC CTTGGAGAGT CTCTGAGCAT AGATTTAGCA CAACATGGTC TTGAAGTGAG TATTGTTCGC CCCGGATTTG TGAGTACCCC TTTAACGGCA AAAAATGACT TTCCCATGCC GATGCAGGTA ACCAGTCAGC AGGCTGCTAT TTGCATCGCT AAGGGCTTAG CTAAAGGTAA GCATCATATC GATTTCCCCT CCAGTTTTAC CTTCTTAATG AAACTATTGG CTTGTTTACC TTTTAGTGTT TGGCGTCGAC TCGCCATAAG GATGTAG
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Protein sequence | MRTVMITGAS SGIGKALAQH YDQLGWQVLA CGRDQNRLME VASSAQTIQT LAFDLTDKKQ VEQISSDLPA LDMLVFNAGD CRYIDNAMDF DAESFETIIQ TNLISVAYGL KAWLKHMKKG GRVVFVSSSA ELLALPRAEA YGASKAALSY LGESLSIDLA QHGLEVSIVR PGFVSTPLTA KNDFPMPMQV TSQQAAICIA KGLAKGKHHI DFPSSFTFLM KLLACLPFSV WRRLAIRM
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