Gene Swoo_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2773 
Symbol 
ID6117081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3389656 
End bp3390375 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content40% 
IMG OID641634313 
Producthypothetical protein 
Protein accessionYP_001761144 
Protein GI170727118 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.725138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.544458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTG GCATCTACCA AGGGCTGGTG TATCACCGTA GGCAGGGAAC GTTTGAACAT 
GAATTCACTT ACTCTATCTA CATGATGGCT ATCGATATTG ATGAGCAGGA ACAGGTATTT
CATCAAAGTT ATATCTTAGG GCTAAATTGG TTTAACCCTA TCCGTTTTCG TGAAAAAGAT
TACCTCCAAA GTGAACCAGG AGAGCTTAAA GAACGTATTG CTAATAAAGT TGAACAGTTA
GGCGGTAAAC CGATAGATGG TCGAGTATTG ATGCTAGTTC AGTGTCGCTG TTTCGGTATC
TATTTTAGCC CCATAAACTT TTACTTTTGT TACGACAAAA ACGATGTTTG TCAGTATATG
CTTGCTGAAG TGAGTAATAC TCCTTGGAAC CAATGCCATT ACTACCTTAT TGATATGAAA
GGGGATATGG TGATTGATAA AGCATTTCAT GTGTCGCCGT TTATGGAGAT GGATATGCGT
TATCACTGGC GAGTTATTCC GCCTTCAGAT AAAGCGTTTG TACGGATTGA AAATCATAAA
GAGGGCAAGC AGTTTGAAGC CAGTTTGGCG TTGAATAAGC GGGAGATTAG CCGACGTCAC
CTGTTTAAAA CTTGGTTAAG CCTGCCTGTT ATGAGTGTCA ATATTGTATT CGGGATCTAT
TGGCAAGCGT TAAAACTGTT TTTGAAAAAA GTTCCTTTTA TTGCTCACCC TGAAGGGTAA
 
Protein sequence
MKSGIYQGLV YHRRQGTFEH EFTYSIYMMA IDIDEQEQVF HQSYILGLNW FNPIRFREKD 
YLQSEPGELK ERIANKVEQL GGKPIDGRVL MLVQCRCFGI YFSPINFYFC YDKNDVCQYM
LAEVSNTPWN QCHYYLIDMK GDMVIDKAFH VSPFMEMDMR YHWRVIPPSD KAFVRIENHK
EGKQFEASLA LNKREISRRH LFKTWLSLPV MSVNIVFGIY WQALKLFLKK VPFIAHPEG