| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2734 |
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| Symbol | |
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| ID | 6117042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3349814 |
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| End bp | 3350503 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634274 |
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| Product | protein TolQ |
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| Protein accession | YP_001761105 |
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| Protein GI | 170727079 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000106629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGAAGCTG ATATTTCATT TATTGGATTA TTTTTACAGG CCAGTTTATT AGTTAAGTTT
GTCATGCTGA CGTTGTTGGC TCTCTCAGTG GTTTCATGGG CTGTGATAAT TCAGCGTCGC
CGGTTATTGA CTGCGGCGAG ACAGAGCTCG CTTAAATTCG AAGATAAGTT TTGGTCAGGT
GTAGATCTGA ATAAACTCTA TAAAGAGTTA TCGGCAAGAC AAGATAGTAA CGCGGGATTA
GAAGCACTAT TTCACTCAGG TTTTAAAGAG TATGCCAGAC TCAGTAAGTT GAATAATAAG
GTTCCTGAGG CTGTTATGGA TGGCAGTTAC CGAGCGATGC GCGTTTCACT CTCTAGAGAG
ATGGAAAAAT TAGAAACTCA TCTACCTCTG TTGGCTACAA TCGGCTCGAC AAGCCCTTAT
ATTGGTCTGT TTGGGACGGT ATGGGGGATC ATGAACTCAT TTATCGCCTT AGGTGCTGTA
GAAAATGCAA CGTTAGCTAT GGTTGCCCCC GGTATTGCTG AGGCGTTAAT TGCGACAGCA
ATGGGTCTAT TTGCAGCTAT TCCTGCCGTT ATCGCCTATA ACCGCTTTTC GACGCAAGTG
GATAAGATTG AGATGTCATA TGCGAACTTT ATGGAGGAGT TCTCAAGTAT TTTACACCGC
CAAGCCTACA GCGAAAAGGA TGAAGCATAA
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| Protein sequence | MEADISFIGL FLQASLLVKF VMLTLLALSV VSWAVIIQRR RLLTAARQSS LKFEDKFWSG
VDLNKLYKEL SARQDSNAGL EALFHSGFKE YARLSKLNNK VPEAVMDGSY RAMRVSLSRE
MEKLETHLPL LATIGSTSPY IGLFGTVWGI MNSFIALGAV ENATLAMVAP GIAEALIATA
MGLFAAIPAV IAYNRFSTQV DKIEMSYANF MEEFSSILHR QAYSEKDEA
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