| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2723 |
|---|
| Symbol | |
|---|
| ID | 6117022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3333975 |
|---|
| End bp | 3334586 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641634254 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_001761094 |
|---|
| Protein GI | 170727068 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0014021 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATACAG TGTGTGTCGA TGGTAAAAAT TTTAGCCCTT CCAAAATTAT CTGTGTAGGA
CGAAATTATG TGGAGCATAT TCGTGAGTTA AACAATGAGG TCCCTGATGA GCTTCTGTTA
TTTGTTAAAC CAAATTCAGC CATTTCAACA GAGTTAACCA GTTTTCATCA AGAAGCGTTG
CACTATGAGG CTGAACTTAG CTTTTTATAT GAGAATGGCA GGTTTAGTGC TGTCGGGCTC
GGATTGGACT TGACCAAACG AGCACTGCAG AGCGAGTTGA AAGCCAAAGG TTTACCTTGG
GAGAGAGCAA AAGCGTTTGA CGGCTCTGGG TTATTTTCAT CTTTCGTTTA TATCGAGAAG
ATAAGTAGTG AGCTCAATTT TAAATTAACT ATCAATGGTA ACTTAGCCCA GAGTGGTCAT
ATTAAGTTGA TGATGAACTC TCCTGAGCGA ATTTTGACTG AAATAAGCTC ATTTATGCGC
TTAGAGGATG GTGATATTGT GATGACGGGG ACTCCAAAAG GTGTCGGCGA GATCCATCTA
GGTGATCGCT TCGAGTTAAC TCTATTTGAC GAAGAGGTTG AATTGACTAA GGCAGCATGG
AAAGCTAAGT AA
|
|---|
| Protein sequence | MNTVCVDGKN FSPSKIICVG RNYVEHIREL NNEVPDELLL FVKPNSAIST ELTSFHQEAL
HYEAELSFLY ENGRFSAVGL GLDLTKRALQ SELKAKGLPW ERAKAFDGSG LFSSFVYIEK
ISSELNFKLT INGNLAQSGH IKLMMNSPER ILTEISSFMR LEDGDIVMTG TPKGVGEIHL
GDRFELTLFD EEVELTKAAW KAK
|
|---|
| |