| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2721 |
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| Symbol | |
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| ID | 6117020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3331730 |
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| End bp | 3332389 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634252 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001761092 |
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| Protein GI | 170727066 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.001499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTAG AAAATTTAAA TATAATCATC GCAGATGATC ACCCGTTATT TCGCAATGCA
CTTCGTCAGG CGCTGAGCGG CCCATTTGCA GATACTCATT GGTTTGAGGC TGATAGTGCA
GAAGCGCTTC AAACTCTGCT TGAAAAATCT GATGTTGAAT ACGATCTTGT CTTACTGGAT
CTTCAGATGC CAGGCTCACA CGGCTACTCA ACATTAATTC ACCTACGCAC CCACTACCCG
GAGCTGCCTG TTGTCGTCAT TTCGGCCCAC GAAGACAACA TCACCATAAG CCGAGCGGTA
CACTACGGCA GTGCTGGTTT TATTCCTAAA TCTTCATCCA TGGACTCTCT TGCTGAAGCC
TTAACCTCTG TACTCTATGG AGATATTTGG TTACCACAAG ATGTAGAGCT ACAAGACATT
GAGGAGGATG CGACGGCGCT GATAGCCAGT AAGTTATCGG ATCTCACTCC ACAGCAATAC
AAGGTGCTGC AGATGTTTGC CGAAGGACTG CTTAATAAAC AGATCGCTTA TGACTTAGGT
GTGTCAGAAG CCACCATCAA GGCTCATGCC ACCGCAATAT TTCGTAAACT CGGTGTACGA
AATCGAACTC AGGCCGTGAT ATCACTGCAA CAGCTTGAGA TGGAAAAAGT CGAACTGTAA
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| Protein sequence | MKLENLNIII ADDHPLFRNA LRQALSGPFA DTHWFEADSA EALQTLLEKS DVEYDLVLLD
LQMPGSHGYS TLIHLRTHYP ELPVVVISAH EDNITISRAV HYGSAGFIPK SSSMDSLAEA
LTSVLYGDIW LPQDVELQDI EEDATALIAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVISLQ QLEMEKVEL
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