| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2715 |
|---|
| Symbol | |
|---|
| ID | 6117014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3320985 |
|---|
| End bp | 3323354 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641634246 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_001761086 |
|---|
| Protein GI | 170727060 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000237182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00109533 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAACAAT ATGTACTCTG GTATCAAGAA TTAAGCATGG GTGACGTCAA CAAGGTAGGC
GGTAAAAACG CTTCTCTTGG AGAGATGATT AGCAATTTAT CTAACGCAGG TGTTCAAGTG
CCTGGCGGTT TTGCAACCAC CTCTCACGCG TTCAATGAGT TTCTTGAACA AAGTGGACTT
AACCAGAAGA TATACGACAC TCTAGATGTT TTAGATGTAG ATGACGTGAA CGCACTCGCT
ACAGCCGGTG CACAGATCAG ACAATGGGTG ATCGATACCC CATTCCATAG CGAATTTGAG
CAAGTTGTTC GTGATTCATA CGATAAGCTC TCCTCTGAAA CTAAAGATGC CTCATTTGCG
GTTCGCTCCT CTGCGACTGC TGAAGATATG CCTGATGCAT CATTCGCTGG CCAACAAGAA
ACATTCCTGA ACGTTAAAGG TTATGATTCT GTTTTGGTCG CAATTAAGCA TGTTTTTGCT
TCTTTGTTTA ACGACAGAGC TATTTCATAC CGTGTTCACC AAGGTTATGA CCATAAAGGT
GTTGCCTTAT CTGCCGGTGT TCAGCGTATG GTTCGCTCTG ATACCGCCGC TTCTGGTGTT
ATGTTCACCA TGGACACTGA GTCTGGTAAC AATGATGTGG TATTTATTAC CTCTTCATTT
GGTCTAGGCG AAATGGTTGT TCAAGGTGCA GTTAACCCAG ATGAATTTTA TGTGCATAAG
CCAAGCTTAA CTGCAGGCAA TAAAGCGGTT GTACGCCGTA ATATTGGTAG CAAGTTGATA
CAGATGGTTT ATTCAGATGA TCTTGAACAT GGCAAACAGG TTAAGATTGA AGATGTACCA
GCCGATCTAC GTCGCCAATT CTCAGTGAAT GACGATGAAG TGATGGAGTT GGCTAAGCAG
GCTATGATCA TCGAGAAACA CTACGGTCGT CCAATGGATA TCGAGTGGGC TAAAGATGGT
AATGATGGCA AGCTTTATAT CGTTCAAGCT CGTCCAGAGA CAGTCCGTTC TCGTGAAGAT
GTGCAGTTGA TTGAACGTTA TCATCTACAG ACTAAGAGCG ATGTTATCTG TGAAGGCCGC
GCAATCGGTC ATAAGATAGG TAGCGGTGTT GCTAAAGTGC TGTCTTCAAT CGATGATATG
GACCAGATCC AAGACGGTGA TGTTCTTGTT ACTGACATGA CTGATCCAGA TTGGGAGCCA
ATTATGAAGC GCGCTAGCGC GATTGTCACC AACCGTGGCG GACGTACTTG TCATGCAGCG
ATTATCGCTC GTGAGCTTGG GGTTCCAGCT GTTGTAGGTT GTGGTGATGT GACTGAGCGT
ATTAAGAACG GTCAGGAAGT GACTGTTTCT TGTGCCGAAG GTGATACTGG CTTTATCTAC
GAAGGTGTTC AAGAGTTTGA TGTTGTTCGC TCTCGTGTCG ATTCAATGCC TGAGTTGCCG
ATGAAGATAA TGATGAACGT GGGTAACCCT GACAGAGCAT TCGATTTTGC TCGTCTTCCT
AATGAAGGTG TTGGTCTAGC GCGTCTTGAG TTTATCATTA ACCGCATGAT CGGTATTCAC
CCTAAAGCTC TTCTTGAATT TAACCAACAA GATGCTGCGC TACAGGCTGA AATAAATGAG
ATGATTGCAG GTTACGATTC TCCTGTTGAG TATTATGTTG CGCGTTTGGT TGAAGGGATT
GCGACGATAG CTTCAGCTTT CCATCCAAAG AAAGTGATTG TTCGTATGTC TGATTTTAAG
TCAAACGAAT ACGCTAACTT GGTGGGTGGC GATAGGTATG AGCCAGAGGA AGAGAACCCA
ATGTTGGGCT TCCGTGGTGC TAGCCGTTAT ATCTCTGAGT CCTTCCGTGA TTGTTTTGCA
CTTGAGTGTG AAGCGATTAA ACGTGTTCGT AATGAGATGG GCTTAAAGAA CGTTGAGATT
ATGATCCCAT TTGTTCGTAC AGTCAGTGAA GCATCACAGG TGATCGAGCT GCTGAAAGAG
CAAGGTCTTG AGCGTGGTAA AGATGGACTT CGTGTCATCA TGATGTGTGA GCTTCCATCT
AACGCCCTGT TAGCTGATCA GTTCTTAGAG CATTTCGATG GCTTCTCTAT CGGCTCAAAC
GATTTGACTC AGCTGACATT AGGTCTAGAT CGTGACTCAG GTATCATCAG CCATCTATTT
GATGAGCGTA ACGATGCAGT GAAGGCATTG TTAGCAATGG CAATTAAAGC GGCTAAAGCT
AAGGGCGCTT ACGTTGGTAT TTGTGGTCAA GGTCCTTCAG ATCATGCAGA TTTTGCGGCT
TGGTTGGTTG AGCAGGGGAT TGATACTGTG TCACTAAACC CAGATACCGT TATCGATACT
TGGTTGTACC TAGGTAAAGA GCACGCTTAA
|
|---|
| Protein sequence | MQQYVLWYQE LSMGDVNKVG GKNASLGEMI SNLSNAGVQV PGGFATTSHA FNEFLEQSGL
NQKIYDTLDV LDVDDVNALA TAGAQIRQWV IDTPFHSEFE QVVRDSYDKL SSETKDASFA
VRSSATAEDM PDASFAGQQE TFLNVKGYDS VLVAIKHVFA SLFNDRAISY RVHQGYDHKG
VALSAGVQRM VRSDTAASGV MFTMDTESGN NDVVFITSSF GLGEMVVQGA VNPDEFYVHK
PSLTAGNKAV VRRNIGSKLI QMVYSDDLEH GKQVKIEDVP ADLRRQFSVN DDEVMELAKQ
AMIIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLQ TKSDVICEGR
AIGHKIGSGV AKVLSSIDDM DQIQDGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA
IIARELGVPA VVGCGDVTER IKNGQEVTVS CAEGDTGFIY EGVQEFDVVR SRVDSMPELP
MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ DAALQAEINE
MIAGYDSPVE YYVARLVEGI ATIASAFHPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP
MLGFRGASRY ISESFRDCFA LECEAIKRVR NEMGLKNVEI MIPFVRTVSE ASQVIELLKE
QGLERGKDGL RVIMMCELPS NALLADQFLE HFDGFSIGSN DLTQLTLGLD RDSGIISHLF
DERNDAVKAL LAMAIKAAKA KGAYVGICGQ GPSDHADFAA WLVEQGIDTV SLNPDTVIDT
WLYLGKEHA
|
|---|
| |