| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2702 |
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| Symbol | |
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| ID | 6117001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3305861 |
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| End bp | 3308083 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634233 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001761073 |
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| Protein GI | 170727047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.191551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0232345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ATTCAACCAT TATCTATACT GAAACAGATG AAGCACCGGC ACTCGCCACC
CTATCTTTAC TGCCTATCAT TAAAACTTTT ACTCAAGCGG CAGGCGTGAA TGTAGAAACC
CGTGATATCT CTCTTTCGGG TCGAGTTATT GCAAACTTTC CTGAGAAACT ATCAGACAGT
CAGAAAATAG GTGATGCCCT TGCTGAGCTG GGTGTTCTAG CTGGTAAGCC TGAAGCGAAT
ATCATTAAGC TACCGAATAT CAGTGCCTCT ATTCCTCAAC TCAAAGCGTG TATTTTAGAA
TTACAAAACA AAGGCTACGA TATTCCTTCA TATCCAGATG AGCCTGCAAA TGATGCAGAG
CGTGAAATAA AAGCGCGTTT TGATAAGATC AAAGGAAGCG CAGTAAACCC AGTTCTTCGT
GAAGGTAACT CAGATCGTCG TGCACCAGGT TCTGTAAAGA AATATGCACA GAAAAATCCT
CATTCAATGG GTGCATGGAG CACAGACTCT AAAAGCCACG TTGCACATAT GAGTGAAGGT
GATTTTTACG GCAGTGAAAA GTCCTTAACC TTAGAGGCCG ATCAACAGGT CAACATAGTG
CTGGCTAAGG CTGACGGTAC TGAGCAGATC CTGAAGTCGT CGTTGGGATT ATTAGCTGGT
GAGGTAGTTG ATGCTGCTGT GATGAGTAAA AAAGCGCTTA TCAGCTACTT TGAGCGTGAG
ATTGATGAGG CAAAAAACCA AGGTGTGCTG CTTTCACTTC ACTTAAAAGC CACCATGATG
AAGGTCTCCG ATCCAATTTT GTTCGGTCAT GCGGTTAAAG TTTATTATAA AGAACTGTTT
GCAAAGCATG GAGAGTTATT TGAAGAGCTA GGTGTCGATG TTAATAACGG TGTTGGTGAT
GTTTACGCCA AGATAGCTCA ACTTCCAGCT GAGCAAAAAG CCGCGATTGA AGCGGACATT
GCTGCTATAT ATGAAAGCCG TCCTGAGCTT GCGATGGTTG ATTCAGATAA GGGGATCACT
AATTTACACG TACCAAGTGA TGTGATTATT GATGCTTCAA TGCCTGCCGC AATTCGTACA
TCAGGCATGA TGTGGGGCGT GGATGGTCAG CCAAAAGATA CCAAAGCGAT GATCCCTGAT
CGTTGTTACG CGGGTGTTTA TCAAGAGACT ATCTCTTTTT GTAAAGAGCA TGGCGCATTT
AATCCAACGA CCATGGGTAG TGTACCAAAC GTTGGTTTGA TGGCCCAAAA GGCGGAAGAG
TACGGTAGCC ACGATAAAAC ATTTGAGATC CCAGCAGCAG GTACCGTTAA GGTGGTTAAT
GGTCAAGGAG AAGTGCTTCT TTCCCATGAC GTTGAAGCTG GTGATATCTG GAGAATGTGT
CAGGTAAAAG ATGCACCTAT CCGTGACTGG GTTAAACTTG CAGTTAAGCG TTCACGCCTA
TCTTCAACAC CAGCGGTATT CTGGTTAGAT GTAAACCGTA GTCATGATGC AGAGATCATT
AAAAAGGTTA ATCAATATCT TCCTGAGCAT GATACTGAAG GGCTAGATAT CCGTATTATG
TCTCCGGTTG AAGCGACACG TTTTACCTTG GCACGTACTA AAGATGGGCT CGACACTATC
TCTGTCACTG GTAACGTATT GCGTGATTAC CTAACAGATC TGTTCCCAAT TTTAGAGCTT
GGTACGAGTG CTAAAATGCT CTCTATCGTA CCGCTAATGA ATGGCGGTGG ATTATTTGAA
ACTGGTGCTG GTGGTAGTGC ACCTAAGCAT GTTCAGCAAG TTGAAAAAGA GGGTCACTTG
CGTTGGGATT CACTAGGTGA GTTTTTGGCA TTAGCAGCGT CTCTTGAGCA CCTAAGCCAA
ACGACCAATA ATCCTAAAGC TCAGGTGCTA GCAGATACAT TGGACGCCGC TATCGGTCAG
TTCCTAGATC AAAACAAGTC GCCTTCACGT CGCGTTGGTC AACTGGATAA TCGTGGCAGT
CATTTCTATC TTGCTATGTA CTGGGCTCAG GAAGTCGCTA AGCAGACTCA AGATGCGGAG
CTTAAAGCGC ACTTTGCTTC ACTGGCAGAA TCTTTGACTA ACAATGAAGC TAAGATTGTT
GATGAGCTGA ACTCTGCGCA AGGTGCAGCA GCAGATCTTG GTGGCTATTA CCGTTTAGAT
GCTGCTAAAG CGTCAACTGA GATGCGTCCA AGTGCGACAT TAAATGGATT GTTTACTGCA
TAA
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| Protein sequence | MTDNSTIIYT ETDEAPALAT LSLLPIIKTF TQAAGVNVET RDISLSGRVI ANFPEKLSDS
QKIGDALAEL GVLAGKPEAN IIKLPNISAS IPQLKACILE LQNKGYDIPS YPDEPANDAE
REIKARFDKI KGSAVNPVLR EGNSDRRAPG SVKKYAQKNP HSMGAWSTDS KSHVAHMSEG
DFYGSEKSLT LEADQQVNIV LAKADGTEQI LKSSLGLLAG EVVDAAVMSK KALISYFERE
IDEAKNQGVL LSLHLKATMM KVSDPILFGH AVKVYYKELF AKHGELFEEL GVDVNNGVGD
VYAKIAQLPA EQKAAIEADI AAIYESRPEL AMVDSDKGIT NLHVPSDVII DASMPAAIRT
SGMMWGVDGQ PKDTKAMIPD RCYAGVYQET ISFCKEHGAF NPTTMGSVPN VGLMAQKAEE
YGSHDKTFEI PAAGTVKVVN GQGEVLLSHD VEAGDIWRMC QVKDAPIRDW VKLAVKRSRL
SSTPAVFWLD VNRSHDAEII KKVNQYLPEH DTEGLDIRIM SPVEATRFTL ARTKDGLDTI
SVTGNVLRDY LTDLFPILEL GTSAKMLSIV PLMNGGGLFE TGAGGSAPKH VQQVEKEGHL
RWDSLGEFLA LAASLEHLSQ TTNNPKAQVL ADTLDAAIGQ FLDQNKSPSR RVGQLDNRGS
HFYLAMYWAQ EVAKQTQDAE LKAHFASLAE SLTNNEAKIV DELNSAQGAA ADLGGYYRLD
AAKASTEMRP SATLNGLFTA
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