| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2614 |
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| Symbol | |
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| ID | 6116913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3195936 |
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| End bp | 3197756 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634146 |
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| Product | AsmA family protein |
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| Protein accession | YP_001760986 |
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| Protein GI | 170726960 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.745873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.322867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TGAAATGGTT TTTTATCGTG TTTTTGCTCC TTTTTACCTC TCTTATTGCG
TATCTAACGC TTATTTTCGA TCCAAACGAT TTTAAACCTG AATTGGTCGA CGCTGTAAAA
GAGAAGACTG GGCGTGATCT GGTTATTGAA AATGATCTTA GTTGGACTTT TTTCCCCTCT
ATAGGGATTG AGTTATCTCA GATATCACTT TCAAACCCAA CTGGCTTTGA TGCTGCCTCG
ATGTTGAAAG TGAATAATGT GGTGGCTGAA GTCGCGTTAA TGCCACTATT TAGTAAAGAG
GTTGAGATTG CCCAATTAAA TCTTGATGGC CTAACGGTCA ATCTAGAGAC TCGCAAAGAT
GGACAAACGA GTTTTGACGG CTTAGATGGT GGTGCCTCCC AAACTAAAGC GGCAGACACA
GATACAAAAG CTGGTGGAGC TCAACTTGCT AGCTTGGATA TTGGTGGTAT TGCAATTACC
AACACGACAA TCACAATGAC TGATGCGATT GCGGGAACTG AGCAAGTTTT CACCATGGAT
AAACTAACAT TAGGTGAATT TAGTTTAGGT AAATTTGCGC CACTTGCCTA TGAGTTAACA
GCTGAACTAC CTGATATGAC TTTGACCAGC CAAGGTGAGG GAATGATTAA GATTGCTCCG
TCGATGCAGG CTGTTGAATT AAAAGATCTG AAAATTGAGA GCTCAGTTAT AGGCGAGGGG
ATCCCTAATC AAAAACTAGA TACTCAGTTA CTTGCACAGA TCCAACTACT CTTGGATAAG
AAATTACTTG AAGTGAGCCT AGATGAACTT GCAGTGGCAG ATATTAAAGG CTCTGGTGAG
GTGAAAGTCG CTTATGGTAG TAAAGTGCCT AATATACATG GTCAATTGGA TCTTGGTGAT
ATCAATTTAG ACACTTTTAT GCCAGCTGAT AAAGCGACTG AAGAGAAATC GAACTCACCG
CAAGCTAGCT CAAATAAGGA GCCTGATCTC TCTGCGCTTA AGTTAGTCAA CTTTGATCTC
GCTATGACGG TAAAGTCGAT AAAAGCGGCC AATATGCTGA CGAGTAACTG GGTGATGAAG
ACTAAGCTAA ACAATGGTGT TTTGAACATG AGCCAGTTAA CTGCCGACCT TTATCAAGGT
AAGTTATCAG CAAGTGCACA GCTCGATGGA CGTCAAAAAA TAGCTAGCTA TAGCTTCGAT
AAATCTGTGA AAGGCGTGCA AATTCTTGAT TTAATGAAAG ATGCTGCTGA AATTGATCTT
ATAGCTGGTA CCGCTAACTT TAATGTTAAA GGTAAAGGGA GAAGTTTAGT TGTTGATAAT
ATAAAGAAAA ACTTAGCCGC GAACGGTAAG TTTGAGATTG CTGATGGTGC ACTTTATGGG
GTCAATATTC CTCAGATGAT CCGCGATGCT AAGGCGAAAC TCAGTGGCGA TCTTTCCAGT
TCAGCGACTG CGGAACAAAA AACCGACTTT ACTAGTTTAA CTGGTTCATT CAACGTAGTT
AATGGCGTCG TCTCTAATCC TGATCTATTG ATGGCTTCTC CCCTCATACG ACTTGCAGGC
GCTGGAACCG CGAATATTGT CAGTGAGGCA TTAGATTACT CTCTAACTAC CTCTGTTGTT
GGCTCGCTTG AAGGGCAAGG AGGAGGCGAT CGCGATGCGC TTCATGGTAT AGAGATACCA
TTTGCTATCA CTGGTACATT CTCTGAGCCT AAATTTGCAT TAGACACTGA AGCTTTGTTT
GATGCTAAGT TGAAGCAGGA GACCGATAAG GTCAAAGATA AAGTGAAAGA CAGTATCTTG
AAGAAGTTAG GGGGCTTTTA A
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| Protein sequence | MKILKWFFIV FLLLFTSLIA YLTLIFDPND FKPELVDAVK EKTGRDLVIE NDLSWTFFPS
IGIELSQISL SNPTGFDAAS MLKVNNVVAE VALMPLFSKE VEIAQLNLDG LTVNLETRKD
GQTSFDGLDG GASQTKAADT DTKAGGAQLA SLDIGGIAIT NTTITMTDAI AGTEQVFTMD
KLTLGEFSLG KFAPLAYELT AELPDMTLTS QGEGMIKIAP SMQAVELKDL KIESSVIGEG
IPNQKLDTQL LAQIQLLLDK KLLEVSLDEL AVADIKGSGE VKVAYGSKVP NIHGQLDLGD
INLDTFMPAD KATEEKSNSP QASSNKEPDL SALKLVNFDL AMTVKSIKAA NMLTSNWVMK
TKLNNGVLNM SQLTADLYQG KLSASAQLDG RQKIASYSFD KSVKGVQILD LMKDAAEIDL
IAGTANFNVK GKGRSLVVDN IKKNLAANGK FEIADGALYG VNIPQMIRDA KAKLSGDLSS
SATAEQKTDF TSLTGSFNVV NGVVSNPDLL MASPLIRLAG AGTANIVSEA LDYSLTTSVV
GSLEGQGGGD RDALHGIEIP FAITGTFSEP KFALDTEALF DAKLKQETDK VKDKVKDSIL
KKLGGF
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