| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2613 |
|---|
| Symbol | |
|---|
| ID | 6116912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3195346 |
|---|
| End bp | 3195936 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641634145 |
|---|
| Product | intracellular proteinase inhibitor domain-containing protein |
|---|
| Protein accession | YP_001760985 |
|---|
| Protein GI | 170726959 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0728657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.768995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC ATATGTTGTT AGCATCCCTT GCTATTGTTA GTTTGACCGC TTGTTCTCAA
AGTAATCTTG ATAATAAGCT GGATTCGGTT GCTAAAACTC AGCCTGTGGA GGCTGATATG
CCTAAAGAGC AAAAGGTTAA GGTTGTTGTT TTAGCAAAAG ATGACGTGGA TATTACAAAG
TTACAAAAAC AACACGCGGA GGGGAAGATG ACCAAAGGCC TCTTAACTGG CGAACTTGAT
GCTACTCTCG ATAATGGCTT ATTGGTTTCA CTTAAGATAC TTAATAATCA ACCTTATGGT
GTGCCAATTC AATATCGCTC AGGGATGACA GCAGATCTGC AACTTCTAGA TCCTATGGGA
GACAAAGTTT GGGCATGGTC GAATGAGATG ATGTTTACTC AAGCCATTAG AGATACCGTG
ATCCCATCTG GGAAAGAGAT GACGGTTAAA TTTAAGATCC CCCAAACCGT GATGAGTCAG
CTAAAGGGGA AAGGCTATAC CATTAAGGCC ATCTATGCGG GCCAGGCGAT AGAGTCAAAA
GAGTTGGCGA TGGGCGATAT TAGCTTGTCA CTTAACGACA TTTTGAATTA A
|
|---|
| Protein sequence | MNNHMLLASL AIVSLTACSQ SNLDNKLDSV AKTQPVEADM PKEQKVKVVV LAKDDVDITK
LQKQHAEGKM TKGLLTGELD ATLDNGLLVS LKILNNQPYG VPIQYRSGMT ADLQLLDPMG
DKVWAWSNEM MFTQAIRDTV IPSGKEMTVK FKIPQTVMSQ LKGKGYTIKA IYAGQAIESK
ELAMGDISLS LNDILN
|
|---|
| |