| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2611 |
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| Symbol | |
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| ID | 6116910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3192842 |
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| End bp | 3193633 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641634143 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_001760983 |
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| Protein GI | 170726957 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00328129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.860285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAGTG AAACTGATTT AACCATCACC CCCATTCAAG CATTTAATGA TAACTACATA
TGGGTTATCT CTAAATCTAG CTCACCTTTG GTTTATGTGG TCGATCCCGG TGATGCTAAT
GTTGTTATAC ATTACCTTGA AACGAACCAG CTCACACTAG CAGGAATATT GATAACACAT
CACCATAGTG ATCATACAGG CGGCATTAAG TCACTGATAG AGTACAGTGC AACTGACCTT
GAAATATACG GACCATCGAG TGAGAACATT GCAGATATTA ATAATCCCAT TTCGACTCAA
CCCCATATCA AGCTGCAAGC ATTAGAGTTA ACCGCAAGGG TTTATCAATT ACCCGGTCAC
ACCCTTGGGC ATATTGCCTA CCACATTCAA GATGAACTGT TTTGTGGTGA TACGCTATTT
AGTGGAGGAT GTGGTCGTTT ATTTGAAGGA ACAGCAAGTC AGCTACACCA CTCCCTAGAG
TTGCTGGCAT CGCTAGAACA ACACACTCGC GTATACTGTG CCCATGAATA CACCTTATCA
AACCTTAAGT TTGCTATTCG GGTCGAGCCC AATAACAGCC AATTAGCGCA CTACTATCAA
GATTGCCAAA CTTTACGAGC TAACAAAAAG ATAACCTTAC CCTCAACGAT TAAAACCGAA
AAAGAGATAA ACCCTTTTTT ACGTTGTCAC ATCCATGAAA TTGTTAATGC AGTTAATCAA
CATTTCAATC AAAAACCTGT TGATACTGTT ACAACTTTTG GGCTTCTTAG GCAATGGAAA
GACAAGGCTT AA
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| Protein sequence | MPSETDLTIT PIQAFNDNYI WVISKSSSPL VYVVDPGDAN VVIHYLETNQ LTLAGILITH
HHSDHTGGIK SLIEYSATDL EIYGPSSENI ADINNPISTQ PHIKLQALEL TARVYQLPGH
TLGHIAYHIQ DELFCGDTLF SGGCGRLFEG TASQLHHSLE LLASLEQHTR VYCAHEYTLS
NLKFAIRVEP NNSQLAHYYQ DCQTLRANKK ITLPSTIKTE KEINPFLRCH IHEIVNAVNQ
HFNQKPVDTV TTFGLLRQWK DKA
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