| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2610 |
|---|
| Symbol | |
|---|
| ID | 6116909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3191867 |
|---|
| End bp | 3192613 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641634142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760982 |
|---|
| Protein GI | 170726956 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000632095 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.867129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACA ATGCTCAACC TTTATCGCCG CAACTGTGGT CACAACTTCC CAGTGGTGAT
CAGATTAAAA GCCTAATAGA GCACATATTG ACGCCTTGGT GGCCTAAGGT GTTTGGTTAT
CATATGCTTA ATCTTGGGGC GCTCAGTGCA GAACTCGATA TGCCTGACCT GCCTATTGGC
CGCCGCTTTT CGTTGTTCGA TGGTAAGGGA GCCTCGATTC GCGCAGAGTT TACTGCGTTA
CCCATCCAAA ATAGTGTGAT CGATGCAGTC GTGATGAATA TGCTTTTGGA GTTTGAACCC
GATCCCTATA AGCTACTTCG TGAAACAGAC AGGGTACTGA TATCTGGTGG CTATCTTTTT
ATCATAGGTT TTAACCCTTT AAGTCCTGCA TTTATTGGTA AATTACTGCC TAAATATCAG
CAACAACAAC CTTGGAATGG CCGCTTTTTT ATGCCCTCTA GGGTAAAGGA TTGGTTGGGG
TTATTAGGCT ATCAGGTGAT ATCTGATGAG CGTTTTCTCT ATCACCATCT GCTAAGTGAT
ATTAAGAGTG AGAGTATATG GCAAGATGCA TTACAAGCTT GGCTTCCAAG TAGTGGCAGC
TTGTACTTGA TTGTGGCGAG AAAACTTGAG TCGCCTTTGA CCCCTATTCA TGAAAAAAGG
AAAGTGAGAC AAACTCAATG GACTACGGCG CCCACAGCGG GTCGAAGCGA ACACTTTAAT
CAAAAACATA AAACTGATAA CTCCTAA
|
|---|
| Protein sequence | MPDNAQPLSP QLWSQLPSGD QIKSLIEHIL TPWWPKVFGY HMLNLGALSA ELDMPDLPIG
RRFSLFDGKG ASIRAEFTAL PIQNSVIDAV VMNMLLEFEP DPYKLLRETD RVLISGGYLF
IIGFNPLSPA FIGKLLPKYQ QQQPWNGRFF MPSRVKDWLG LLGYQVISDE RFLYHHLLSD
IKSESIWQDA LQAWLPSSGS LYLIVARKLE SPLTPIHEKR KVRQTQWTTA PTAGRSEHFN
QKHKTDNS
|
|---|
| |