Gene Swoo_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2606 
Symbol 
ID6116905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3188313 
End bp3189629 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content45% 
IMG OID641634138 
Producthypothetical protein 
Protein accessionYP_001760978 
Protein GI170726952 
COG category 
COG ID 
TIGRFAM ID[TIGR03503] conserved hypothetical protein TIGR03503 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000605576 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTC TAAGATTCCG GGAGCTTATA CTCGGGTTAA TTGCTGTCGT TTGCTTACAA 
TCTAGCGCTA TTGTATCGGC TGATATAGTG CCTTCTGAGC GTGCAAGTGA ATTAAGAAAT
CGCTTTCGTA TCGATCATAT GGTCGACAGC ATGACATTAA TTGTACAACG CCAGTTTGGT
AGCGGCCCTG TTGTCATCGT CTTGCCCGAT GGCAGTAAGT GGTACGCCGA ACGTCACCCT
GAAAATGTAC AGTGGGCAGA GGGGCTAAGC GGTGACATTA TCACCATTAA AAACCCTCTT
CCAGGTCCTT GGCAGTTAAT TGGACGTGTG GTCAAAGGTT CAAGTATTAA GAAAGTCTCA
GAGTTAAATA TCTGGGTAGA GGAGTTTCCA CAGCCTCTTT TTCAAGGGGA GCGTCTAAAG
GTTACTTCAC ACCTTCTTGC TGACAGTAAA ATGCTTAGGA TGCCAGGTTT AGACTATTTG
GTTAACTGGA CCGTTAGGTT TAGCAGTGCT CAGCAGGCAG GTGAAGAGAA TTTTGCTGCG
GGTACCCGAG TTGTTGGCTC ATATAAAGAT AATGGTGAAG ATCTGGATGA ACGTCCAGAT
GACGGTACTT TTACTGGAGA CATCACCTTT AATCAACCTT GGGGAAGTTA TTATTTAGAG
GTGATAGCCA AGAATAATGT GTTTAGTCGA GAGGCGAGCT ATGAGTTTGA ACTATCTCCA
TCTCCTGTCG ATATAGAAGT TATTGAACCT GCCGAACCTT TAAAAGAGCG TTGGAAGTTA
CTTATTGAGG CTGACTCTGA GCAACTTCAA CTCAGTGAAA CTCATCTCGA TCTTGAGTTA
GTTGGGCCAG CTGGTCTGCA GTTACCACTG ATTATCAATG GGCTTACCGA AAGTGAAACT
GAGCTTATCC TACCGGAAGT GACTGATTAT GGTAGTTACC GGATTAAAGG CAGCGCAGTG
AGTACAACGG TATCGGGGAG GGAGGTTGTG CTTGCTTTAC CTGAGCGCTT TTTTAATTTG
ATAGAGCCGC CTAAGCCACC TCCTACAGCT GAAGAGTTGG CTGCAGTGGC TGCGAAAAAA
GCAGCTATTG AGGAGGAGAA GGCAAAAGAT CAAGCGATAT TCTGGATCAT TACCGTCAAT
GTCTGTTTGT TAATCTTTGG CAGTTTAGCT CTGTTAATCT GGCGCAAACG CCGAAACTTA
AAAGAGGCAC TTGCTGCGAC TCAGCTTCGT TTAGACCAAG AGAAAGAGAA GGAGCAAGAT
GTCAGTACTG CTTTAGATGA GATAGATCTG ACAATGCCAG AAGATCCGCC TAATTAA
 
Protein sequence
MTFLRFRELI LGLIAVVCLQ SSAIVSADIV PSERASELRN RFRIDHMVDS MTLIVQRQFG 
SGPVVIVLPD GSKWYAERHP ENVQWAEGLS GDIITIKNPL PGPWQLIGRV VKGSSIKKVS
ELNIWVEEFP QPLFQGERLK VTSHLLADSK MLRMPGLDYL VNWTVRFSSA QQAGEENFAA
GTRVVGSYKD NGEDLDERPD DGTFTGDITF NQPWGSYYLE VIAKNNVFSR EASYEFELSP
SPVDIEVIEP AEPLKERWKL LIEADSEQLQ LSETHLDLEL VGPAGLQLPL IINGLTESET
ELILPEVTDY GSYRIKGSAV STTVSGREVV LALPERFFNL IEPPKPPPTA EELAAVAAKK
AAIEEEKAKD QAIFWIITVN VCLLIFGSLA LLIWRKRRNL KEALAATQLR LDQEKEKEQD
VSTALDEIDL TMPEDPPN