| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2598 |
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| Symbol | |
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| ID | 6116895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3175862 |
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| End bp | 3177589 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634128 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001760970 |
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| Protein GI | 170726944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.823661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.545914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAG TTGCACGAAC TCCGTTACCA AAGACCTTTT TTGTAGCAAA TACCATGGAG
ATTTTTGAGC GTTTGGCTTG GTATGGCTTC TTTACCCTGT CATCACTCTA TATGACCTCG
CCAATACTTC AGGGAGGACT AGGGTTTAGT GAGCAGGAAC GAGGCCTATT ACAAGGGATG
ATCCCCTTCT TCCTCTACCT GGTCCCGGTA CTTACTGGCG CACTGGCCGA TAGATATGGA
TACCGGAAAA TGTTCCTACT TGCATACGCC ATCATGAGTC CCTGCTACTT CTTACTTGGT
CAGGTTGACT CTTTTGCAGG TTTCTTTATT GCCTTTATGG GAGTTGCATT AGGTGCAGCC
TGTTTTAAAC CCGTGGTAAC AGGCACTGTG GCTAGAACAA CAGATGAAAC CAATCGAGGC
CTAGGTTTCG GCATTTTTTA TATGATGGTC AATATCGGTG GCTTTCTTGG TCCGTTTATC
GCCGGATATG TGCGTGCGAT CAGTTGGGAT TGGGTCTTTA TTATGTCCTC ATTCTGGATC
GCCGTGAACT TCATCCCTGC CCTACTTTTT TATCAAGAGC CAACAGATCA AGCTAAGCAA
AAGGGAAAAC CACTAAAAGC TGTGTTATCT GATATTCAAG AGGTACTCGG AAATCTACGA
TTTGCTATCC TCTTTTTTGG TTCATTAGTG ATCTTAATGG CTTATGGAGC TAAGTGGCTA
ACAGGCAATG AAACACTGCT CATCTACCTT GGCTGGTTTG TGGGCCACTA TCTCTGGGAT
CTAAGTGCCA ACACGCAGAA AAATAGACCT TGGTACAGAC AGAAAATCAC TGTAGGAAAC
AAACCCTTCG TCATCTATCT TTTGATCTTA TCCGGCTTCT GGATGGTCTA TCAGCAAATA
TTTATCACCT TACCTATCTA TATTCGCGAC TTTGTCGATA CATCAGATCT CGTCGCGATA
TTGGCGCAAT ATCCACAGCT GCTGAAGTTT TTTGCCCACG TCGAGTTAAA TGCGCTGCAA
ACAGAGTTAT TAAGGCTATC CCAGGCTGTT TCTAATGGAG AGATTAATGT AAAACACGCC
TACTTCGAAC TGGTTCACCT AAAGGTAATG GTACCTATAA ATGAATTAGC TCAAGGTCTC
ACCAGCATTT CTATCGATCC CGCTAAAGCC AGCGAATTGG CCCAAAGCTG GGGCAATCAG
CATAGACAGG TCAACCCAGA ATACTTAATT GGGCTTAACT TCCTCTCTAT CGTTCTGCTG
CAGATCATTG TTAGCCGTTT CATCGAACGT TTTCAAGCAT TGCCAGTACT TGTGGGGGGA
ACTGTGATCT TGGCTCTTGG AACGGCCCTA GGCGGGATTG CTCACGGCAT GATCATGGGC
GGCATCATGG TTTTGACCTC CATCCTCGTA TTCTCCATTG GTGAGATGGT CGCATCACCG
AAAAGTCAGG AATATGTCGC CAGTTTTGCC CCACAAGATA AGAAAGCCAT GTTTATGGGT
TACTACTTCG TATCATCGGC TATCGGCTTT CTACTTGCCG GCCCGCTCTC GGGTTATCTC
TACTCTGAAG TTGCAAAGCA GGCAGGTCGA CCAGATCTAA TGTGGTTTAT CATTGGAGGA
TTTGGGCTTC TCACCGCCAT TGGACTAGTA CTTTTCAATA AGTTCAGTGC CAGCAAGCTC
GTAGAGCAGC AGATAACTCA ATCACCTGTT GAGGAAGCAA GGGTATAG
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| Protein sequence | MTKVARTPLP KTFFVANTME IFERLAWYGF FTLSSLYMTS PILQGGLGFS EQERGLLQGM
IPFFLYLVPV LTGALADRYG YRKMFLLAYA IMSPCYFLLG QVDSFAGFFI AFMGVALGAA
CFKPVVTGTV ARTTDETNRG LGFGIFYMMV NIGGFLGPFI AGYVRAISWD WVFIMSSFWI
AVNFIPALLF YQEPTDQAKQ KGKPLKAVLS DIQEVLGNLR FAILFFGSLV ILMAYGAKWL
TGNETLLIYL GWFVGHYLWD LSANTQKNRP WYRQKITVGN KPFVIYLLIL SGFWMVYQQI
FITLPIYIRD FVDTSDLVAI LAQYPQLLKF FAHVELNALQ TELLRLSQAV SNGEINVKHA
YFELVHLKVM VPINELAQGL TSISIDPAKA SELAQSWGNQ HRQVNPEYLI GLNFLSIVLL
QIIVSRFIER FQALPVLVGG TVILALGTAL GGIAHGMIMG GIMVLTSILV FSIGEMVASP
KSQEYVASFA PQDKKAMFMG YYFVSSAIGF LLAGPLSGYL YSEVAKQAGR PDLMWFIIGG
FGLLTAIGLV LFNKFSASKL VEQQITQSPV EEARV
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