| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2592 |
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| Symbol | |
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| ID | 6116889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3168640 |
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| End bp | 3170598 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634122 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001760964 |
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| Protein GI | 170726938 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.135026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATC GTCGTCAAAC CCGAGCTCAA GCTCAACAAT TTATTGATAC TTTAACACCA
CTTCAACACC CTAATTCAGA GAAGGTTTAT CTGACTGGGA GTCGCGAAGA CCTGCGTGTT
GGTATGCGTC AAATTTTGCA ATCCGATACT TTAGTCGGCG GCACCGAAGC CGATCCCATT
CTTGAGTCTA ACCCACCTTT AAAAGTTTAT GATTGTGCAG GGCCATATTC GGATCCTGAT
GCAGAGATAA ATGTACGCGC AGGCTTGAAT AAATTTAGAC AAAGCTGGAT TGAGGAGCGA
GCTGACACAG AGCAACTTGC TGGTGTTAGC TCAGGCTTTA CCCAGCAACG TTTAGCTGAT
GATGGCTTGG ATCATCTCAG GTTTGATTCA CTGCTTCCTC CACGCAGAGC TCAATCAGGC
AAGCGTGTGA CTCAACTCCA CTATGCAAGG AATGGAATTA TCACTCCTGA GATGGAGTAC
ATCGCCATCC GTGAAAATAT GGAGCAGGCT GGGATCACCG ATCCAGTTTT AAGGCAAAAA
GCCAAAGGAG AAAGCTTTGG TGCCTCTATC GAGCAAGTGA TCACCCCTGA GTTTGTGCGT
CAAGAAGTGG CCCGCGGTCG TGCAATTATT CCTTTGAACA TCAATCATCC TGAAGCTGAG
CCTATGATCA TTGGCCGTAA CTTCTTGGTA AAGGTGAATG CCAATATCGG AAACTCTGCC
GTGACTTCAT CCATTGAGGA GGAGGTTGAG AAACTGGTTT GGTCAACCCG CTGGGGCGCA
GATACCGTGA TGGATCTCTC CACTGGCCGC TACATTCATG AAACCCGTGA GTGGATAATA
CGTAACTCTC CAGTGCCGAT AGGAACCGTA CCCATCTATC AAGCATTAGA GAAGGTCAAT
GGTGTTGCTG AAGATCTTAG CTGGGAGGTG TTTAGAGATA CCTTGGTTGA GCAGGCAGAG
CAAGGCGTTG ATTACTTTAC GATTCACGCA GGGGTTCTAC TTCGCTATGT ACCCATGACG
GCAAAACGGG TGACAGGTAT TGTGTCTCGT GGTGGCTCGA TCATGGCTAA GTGGTGTTTG
TCTCATCATA GTGAAAACTT CCTTTATGAA CACTTCACAG AGATCTGTGA ACTGTGCGCC
GCCTACGATG TCTCGCTTTC ATTGGGTGAT GGCATGCGTC CAGGCTCTAT CGCAGATGCC
AACGATGAGG CTCAGTTTAG TGAGTTAGAG ACCTTAGGAG AGCTGGTTAA AATAGCGTGG
GAGTATGATG TTCAAACCAT TATCGAAGGC CCTGGCCATA TCCCGATGAA CTTAATCAAG
GAGAACATGG ATAAGCAGCT AGCACTCTGT GATGAGGCGC CGTTTTACAC TTTAGGGCCA
CAAACCACCG ATATCGCGCC TGGCTATGAT CATTTTACAT CGGGGATCGG TGCGGCAATG
ATCGCATGGT ACGGCTGCGC CATGCTCTGT TATGTTACCC CCAAAGAACA CCTTGGTCTG
CCCAATAAAG AAGATGTTAA GCAAGGGCTT ATCGCATACA AAATTGCCGC TCATGCTGGT
GATGTGGCTA AAGGGCATCC AACGGCACAG ATCCGTGACA ACGCGCTCTC TAAGGCAAGG
TTTGAGTTCC GCTGGGAAGA TCAATATAAC TTAGGACTCG ACCCTGAGAC AGCTCGCGCT
TATCACGATG AGTCTCTGCC TCAAGAGTCG GCAAAAGTGG CTCACTTCTG CTCCATGTGT
GGGCCTAAAT TCTGCTCTAT GAAGATTAGC CAAGAGGTAC GTGATTACGC CGCATCTCAA
GAGGTTGAGC TGCAATCTCA TGCCAGTTAT CAGGCTAAAA GTGCCTCAGA AATAGAAACT
GGAATGGCGC AAATGTCTGC AGAGTTCAAG GCTAAAGGCG CAGAGCTTTA CCATGAAACG
GCTGTCGTTG ATGAAGAACT CGCGGACGCA GAGGCTTAA
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| Protein sequence | MSNRRQTRAQ AQQFIDTLTP LQHPNSEKVY LTGSREDLRV GMRQILQSDT LVGGTEADPI
LESNPPLKVY DCAGPYSDPD AEINVRAGLN KFRQSWIEER ADTEQLAGVS SGFTQQRLAD
DGLDHLRFDS LLPPRRAQSG KRVTQLHYAR NGIITPEMEY IAIRENMEQA GITDPVLRQK
AKGESFGASI EQVITPEFVR QEVARGRAII PLNINHPEAE PMIIGRNFLV KVNANIGNSA
VTSSIEEEVE KLVWSTRWGA DTVMDLSTGR YIHETREWII RNSPVPIGTV PIYQALEKVN
GVAEDLSWEV FRDTLVEQAE QGVDYFTIHA GVLLRYVPMT AKRVTGIVSR GGSIMAKWCL
SHHSENFLYE HFTEICELCA AYDVSLSLGD GMRPGSIADA NDEAQFSELE TLGELVKIAW
EYDVQTIIEG PGHIPMNLIK ENMDKQLALC DEAPFYTLGP QTTDIAPGYD HFTSGIGAAM
IAWYGCAMLC YVTPKEHLGL PNKEDVKQGL IAYKIAAHAG DVAKGHPTAQ IRDNALSKAR
FEFRWEDQYN LGLDPETARA YHDESLPQES AKVAHFCSMC GPKFCSMKIS QEVRDYAASQ
EVELQSHASY QAKSASEIET GMAQMSAEFK AKGAELYHET AVVDEELADA EA
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