Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2572 |
Symbol | ruvA |
ID | 6116869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3146651 |
End bp | 3147268 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634102 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_001760944 |
Protein GI | 170726918 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0232474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00151008 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGGTC GTTTACGCGG TGTGCTTGTT GAGAAACAAG CACCAGAGAT ATTGCTTGAA GTGGCTGGTT TAGGATATGA AGTTCAGATG CCACTGACCA GTTTTTATGA GCTACCAGAT CTCAATCAGG AAGCACAGAT ATATACCCAT TTTGTGGTGC GTGAAGATGC ACAACTGTTA TACGGCTTTA TCACTAAGCA GGAGAGAGCA CTCTTTCGTC TGTTGATAAA AACCAATGGT GTTGGCCCCA AATTAGGCTT GACTATTTTA TCAGGGATGA CGGCGGGTGA GTTTGTCGCT TGTGTTGAGC GAGATGATAT TGCGACCTTA GTAAAATTGC CTGGTGTTGG GAAGAAAACC GCAGAAAGGT TATTGGTTGA GATGCGTGAT AAGCTTAAAA GCTTACTGGA GACCTCGGCG GGCAGTGAAC GTGAGTTTAT GCTTAAAAGC AACTATACAC CTGCGCCTGT GGTTAATACC GCCGAAGAGG ATGCTATTGC TGCACTGTTA TCGTTAGGCT ATAAACCGGC GCAAGCGAGC AAGGCTGTTT CTGCGGCATT CAAAGAGGGC ATGAGCTCTG AAGACTTGAT TAAGTCGTCA CTTAAGTCAA TGTTATAA
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Protein sequence | MIGRLRGVLV EKQAPEILLE VAGLGYEVQM PLTSFYELPD LNQEAQIYTH FVVREDAQLL YGFITKQERA LFRLLIKTNG VGPKLGLTIL SGMTAGEFVA CVERDDIATL VKLPGVGKKT AERLLVEMRD KLKSLLETSA GSEREFMLKS NYTPAPVVNT AEEDAIAALL SLGYKPAQAS KAVSAAFKEG MSSEDLIKSS LKSML
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