| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2571 |
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| Symbol | ruvB |
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| ID | 6116868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3145616 |
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| End bp | 3146632 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634101 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001760943 |
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| Protein GI | 170726917 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.011868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00180359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGAAG CAGATCGTTT AATTCACGCT GAGCCTCAAG GCATAGAGGA GCGTGATGAG
CAGATTGATA GGGCGATGCG CCCTAAGATG CTTGATGAGT ATACTGGTCA AGATGACAGC
CGTGCTCAAT TAAAAATATT TATTCAAGCG GCTCAAAACC GTGATGAAGC GCTTGATCAT
ATGCTGATTT ATGGTCCGCC AGGTTTAGGT AAAACTACCT TGGCCATGAT TGTAGCTAAT
GAGATGGGGG TTAATATAAA ATCAACCTCC GGTCCTGTAC TGGAAAAAGC AGGGGATTTG
GCAGCCTTGC TGACTAACCT CGAACCTGGC GATGTGCTGT TTATTGATGA AATACACCGT
CTGAGTTCTG TGGTTGAAGA GATCCTCTAT CCTGCCATGG AGGATTATCA GCTTGATATT
ATGATAGGTG AAGGTCCTGC TGCACGTTCA ATAAAATTAG ATCTGCCTCC ATTTACGTTA
ATTGGCGCAA CAACGCGAGC TGGGGCGTTA ACGTCCCCAT TAAGAGCAAG ATTTGGGATC
CCACTGCGAT TAGAGTTTTA CAATGTCAAA GACTTGAGTT CAATTGTGAC CCGTTCAGCA
AATGTACTTG AGCTACCTAT TGATGAAGCT GGTGCCATTG AGTTAGCAAG GCGTTCACGT
GGTACTCCAA GGATCGCTAA CCGTTTATTA AGACGTGTAC GTGACTTTGC TGAGGTAAAA
CATGATGGAG AGATAACCAA GCAGGTTGCC GAACTTGCTT TGGATATGCT TGATATTGAT
TCAGAAGGGT TTGATTATAT GGATCGTAAA CTCCTTCTTG CCATCATAGA TAAATTTATG
GGTGGACCAG TAGGCTTAGA TAATCTGGCT GCTGCGATTG GTGAAGAGCG TGAAACGATT
GAAGATGTTT TAGAGCCTTT TTTGATCCAG CAGGGCTTTA TTCAACGAAC ACCAAGGGGA
AGGATTGCTA CCGATCGTGC CTATCGGCAT TTTGATATCA TTCAACCAGA AAAATAG
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| Protein sequence | MIEADRLIHA EPQGIEERDE QIDRAMRPKM LDEYTGQDDS RAQLKIFIQA AQNRDEALDH
MLIYGPPGLG KTTLAMIVAN EMGVNIKSTS GPVLEKAGDL AALLTNLEPG DVLFIDEIHR
LSSVVEEILY PAMEDYQLDI MIGEGPAARS IKLDLPPFTL IGATTRAGAL TSPLRARFGI
PLRLEFYNVK DLSSIVTRSA NVLELPIDEA GAIELARRSR GTPRIANRLL RRVRDFAEVK
HDGEITKQVA ELALDMLDID SEGFDYMDRK LLLAIIDKFM GGPVGLDNLA AAIGEERETI
EDVLEPFLIQ QGFIQRTPRG RIATDRAYRH FDIIQPEK
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