| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2565 |
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| Symbol | |
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| ID | 6116862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3136282 |
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| End bp | 3138813 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634095 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001760937 |
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| Protein GI | 170726911 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0458531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGAA CATCACAGCA TTCACGTAAT AAATTAGCGA CAGCAATTAA ACTAGGTTTA
ATTGCATCAG TATCAAGTAC TACATTTACA GTATCAAATA CTGCTTTTGC AGAAGAAGCG
GGTGCAGACG TTGAACGCAT TGCAGTTACA GGCTCCCGCA TCCAGCGCCA AGACATGGAA
ACTGCATCGC CAGTAACCGT AATTGGTGCT GACGAAATTC GTGCCGAAGG TTTTACTACC
GTTGACGAAT TGCTACAAGC TCAAACATCT ATGGGCGGTA AAGCAGTAGG TTCAAGCACT
AACAACGGCG CAGACGGTGT AGCTCAAGTA GACCTTCGCG GAATGGGCTC ACAGCGTACA
CTTGTATTGC TAAATGGCCG CCGTATGGTG AACTCAGGTT CAGGTGCAAA CAGCTCTGTT
GACCTTAACT CTATCCCTGT AGCAATGATT GCACGTGTTG AAATCTTAAA AGATGGCGCA
TCAGCTGTTT ATGGCTCAGA CGCTATTGCT GGTGTAGTAA ACATTATCAC TAAGAAAGAC
TTCGAAGGTT TCCAAGTTGA CGTTCAAGGT GGCATGACCG ATAAGAGCGA TGGCGAAAAT
GGTGAGATCA GCGCCCTTTA TGGCTTTAAC ACAGATACCG GAAACTACAC ATTTGGTGCC
GCATATTCAG AGCGTAAAGG TGTAATTCAG TCTGATCGCG ACTGGACAGA TCCAGGTAAT
AGTTCATTTA TTCCAAACGG CTCTTTGGGC GGTAAAGTGA AAGATGAAAA TGGTAACTGG
GTAGACCGCT CAGAAGGCTA CGACTTTACA CAAGACAGCT TCTACCAGAC ACCAAGCAAG
CGTTACAGCC TATTTGCTAA CATGACTCAA GAGCTAGGTG ATGACATCGT AATGACCGGT
GACATTCTAT ATACCAAGCG TAAGTCAAAC CAGCAGCTAG CACCACAGCC TGCCAACATC
ATGCTAGATG TTTGTGCCCC TGGTGATGAC CCTATGACTT GCCTAGAGCT TGATCAAGAT
ATGATTGATG CAGGCATTAG CCCAGACAAG AACGGTCAGG TTAACTACAG AAAACGTATG
AATGACGTGG GTCCACGTAT TTATAATCAG GACACTGATA CATGGCGTAT CTCTGCAGGC
CTTGAAGGTT CGTTAGATAT CAATACAGGT ATGAACTGGG ATGCTTCGTA CACTTACGGT
AATAACAAAG CAAAAACTGG CGTAGAGAAC TCTATTAACG CTAACTTGAT GGCCGATGCT
ATCTATGCTG ACCAAGATCC TTGGTTAACT GGCAAGCCAA TGACTGATCA AGATGTACTC
AATAGTGTTT CTTATGATGA AGAAGCTGAC GGTGGTAACG AGCAGCATGT ATTCTCAGCA
GGCCTTAACG GTGAACTGTT TGACCTAGAT GCAGGTGCCG TTGCATTCGC TATCGGTGCT
GAGTATCGCT ACGAGAGCGG ATACTACAAT CCAGATCCAA TTGTTGTAGC GGGTGAAAGT
ACTGCAGCGC AGCAAGATCC AACAGATGGT AGTTACAATG TTATCTCGGT ATTCCAAGAA
GTGAGCGTGC CGTTTACTGA TAAACTAACC GGTGAATTCG CACTACGTTT TGATGACTAC
TCAACATTTG GTAATGCATC TACTTGGAAG ATTGGTCTTA CTTATGAAGC AACTGATGAC
TTAATGCTCC GTACAGTAGC GGCTACAGGC TTCCGTGCAC CAAGCGTTAG TGAACTATAC
GGTGGTAACT CAGGTTCTTA CGACTACTTG GTTGATCCAT GGGGTAACGA GAAAGACCCA
CAGATCTTAG TCAACCGTAC TTCAGATGAA GATCTTAAGC CTGAAGAGTC AGAGTCTTAT
ACTGCTGGTT TAGTTTACTC GCCAAGCTAT GTTGACGGTC TATCGTTAAC TGTTGACTAC
TGGCGCTTTA AAGTTGAAAA CGCCATTACG CGTCTCGACA CACAAGCTGG TATCGATGCT
TGTTATGGGG GAGATGCATC AGCATGTGAA ACCTTTAATA TTGGTGCAGA CGGTGATTTG
TCTAACTTGA CTAACTCACT AACTAACGTT GGTTTCCAAG ATACAAGCGG TGTTGACTTT
AACTTAGCCT ACAACTTTGA AGCATTAAAC CTTGATTGGG TTGTAAGCAA CGATACCACC
TACTTGTTGA ATTTCGAGCA AGACGGTAAA GAGTACACTG GCACAATCGA TGGTAACTTC
GGTGCATATG CAGAAGTTCG TAACAACTTC AGCATTAAAG CTGGCCAAGA CGATTGGAGC
GTTATGTACT TCAACCGTTA TATCGGTGAA ATGGATGATT TAGCGACAGG TGATACTGTA
GATTCAGTTC TGTACCACAA CCTGTCAGCT ACATACTTCA TCAACGATGA CTGGATGTTA
AGCGCTGGTG TTAAGAACTT TACTGATGAA GATCCATCAA AAGTATCTAA CGGTAGTGAC
GGTGGAACAG TACCAGAAGT TTATGACGTT ATTGGTCGTA CATACTTTGC TGGTGTAACA
ATGAAGTTCT AA
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| Protein sequence | MIRTSQHSRN KLATAIKLGL IASVSSTTFT VSNTAFAEEA GADVERIAVT GSRIQRQDME
TASPVTVIGA DEIRAEGFTT VDELLQAQTS MGGKAVGSST NNGADGVAQV DLRGMGSQRT
LVLLNGRRMV NSGSGANSSV DLNSIPVAMI ARVEILKDGA SAVYGSDAIA GVVNIITKKD
FEGFQVDVQG GMTDKSDGEN GEISALYGFN TDTGNYTFGA AYSERKGVIQ SDRDWTDPGN
SSFIPNGSLG GKVKDENGNW VDRSEGYDFT QDSFYQTPSK RYSLFANMTQ ELGDDIVMTG
DILYTKRKSN QQLAPQPANI MLDVCAPGDD PMTCLELDQD MIDAGISPDK NGQVNYRKRM
NDVGPRIYNQ DTDTWRISAG LEGSLDINTG MNWDASYTYG NNKAKTGVEN SINANLMADA
IYADQDPWLT GKPMTDQDVL NSVSYDEEAD GGNEQHVFSA GLNGELFDLD AGAVAFAIGA
EYRYESGYYN PDPIVVAGES TAAQQDPTDG SYNVISVFQE VSVPFTDKLT GEFALRFDDY
STFGNASTWK IGLTYEATDD LMLRTVAATG FRAPSVSELY GGNSGSYDYL VDPWGNEKDP
QILVNRTSDE DLKPEESESY TAGLVYSPSY VDGLSLTVDY WRFKVENAIT RLDTQAGIDA
CYGGDASACE TFNIGADGDL SNLTNSLTNV GFQDTSGVDF NLAYNFEALN LDWVVSNDTT
YLLNFEQDGK EYTGTIDGNF GAYAEVRNNF SIKAGQDDWS VMYFNRYIGE MDDLATGDTV
DSVLYHNLSA TYFINDDWML SAGVKNFTDE DPSKVSNGSD GGTVPEVYDV IGRTYFAGVT
MKF
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