| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2561 |
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| Symbol | |
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| ID | 6116858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3133507 |
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| End bp | 3134205 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634091 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_001760933 |
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| Protein GI | 170726907 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.428281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0236645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAT ATAAACAGAT AGCATTACAG GGCCTTTGGA AGAATAATCC AGGACTTGTG
CAACTGCTCG GGCTTTGCCC TCTGCTCGCA GTAACTGCAA CCTTGACCAA TGCTTTGGGT
TTAGGCTTAG CCACTATGCT GGTATTGATT GGCTCAAATG TTCTCGTGTC ATTAGTGAAG
AGCCTTGTTC CAAAAGAGAT CCGTATCCCG ATCTTTGTCA TGATCATCGC AGCCTTAGTA
ACATGCGTAC AGCTGCTGGT TAATGCTTAC GCTTATGGAT TATATCTCTC TTTGGGGATA
TTCCTGCCTT TGATTGTGAC CAACTGTGTG ATTATAGGTA GAGCTGAAGC CTTTGCTTCA
CGCAATTCAG TTGTAAAATC TGCTTTTGAC GGTTTTATGA TGGGCCTAGG TTTTTTACTC
GTACTATCAG TATTGGGCGC AAGCCGTGAA ATATTAAGTC AAGGTACACT ATTTGCGGGG
GCTGATCTTC TGCTTGGTGA TTGGGCTGCT GACCTCACTA TCCATTTTTG GCAGTTAGAT
ACCAGCTTCT TATTAGCCAT GTTGCCGCCA GGCGCTTTTA TTGCCATGGG CTTTTTAATT
GCTTTCAAAA ATATTATCGA TAAGAAGTTG GCCGACAGAG CACCGACACC CGATACCGTA
GAAGTTGTTA CCCGTGCCCG CGTCACTAAA GTAAGTTAA
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| Protein sequence | MNEYKQIALQ GLWKNNPGLV QLLGLCPLLA VTATLTNALG LGLATMLVLI GSNVLVSLVK
SLVPKEIRIP IFVMIIAALV TCVQLLVNAY AYGLYLSLGI FLPLIVTNCV IIGRAEAFAS
RNSVVKSAFD GFMMGLGFLL VLSVLGASRE ILSQGTLFAG ADLLLGDWAA DLTIHFWQLD
TSFLLAMLPP GAFIAMGFLI AFKNIIDKKL ADRAPTPDTV EVVTRARVTK VS
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