| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2557 |
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| Symbol | |
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| ID | 6116854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3128881 |
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| End bp | 3129450 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634087 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_001760929 |
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| Protein GI | 170726903 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.229137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.143119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGGTA TTTTAATTGC GATCGTTTTA TTGACGATCT TAGCCCTATT CTTTGGTGTC
TTACTGGGCT TTGCGGCAGA AAAATTCAAA GTTGAAGGTG ATCCACTTGT CGACCAACTT
GAAGCCCTCT TACCGCAAAC ACAATGTGGC CAATGCGGCT ACCCAGGTTG CAGACCCTAC
GCAGAAGCGA TCGCTGGCGG AGAAAAGGTC AATAAATGCC CTCCAGGCGG CACAGCAACC
ATGGAAAAGC TCGCCGATAT GGCAGGTGTA GAGCCTGAGC CTCTGACGGT AAGTGAAGAG
GTTCAAGTCA AAAAAGTGGC CTACATTCGC GAAGATGAAT GTATAGGTTG CACTAAGTGT
ATCCAAGCTT GCCCTGTTGA TGCCATTTTA GGCACAGGCA AACAGATGCA CACAGTGATC
ACTGATTACT GCACTGGTTG CGATTTATGT GTTGCCCCCT GCCCAGTCGA TTGCATCGAT
ATGCTACCTA TTACACCAAC AGTTAAAAAC TGGGATTGGA AATTAAACGC CATCCCAGTA
CAGATGCTTG AAGAGGACAC CAAGTGCTAA
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| Protein sequence | MSGILIAIVL LTILALFFGV LLGFAAEKFK VEGDPLVDQL EALLPQTQCG QCGYPGCRPY
AEAIAGGEKV NKCPPGGTAT MEKLADMAGV EPEPLTVSEE VQVKKVAYIR EDECIGCTKC
IQACPVDAIL GTGKQMHTVI TDYCTGCDLC VAPCPVDCID MLPITPTVKN WDWKLNAIPV
QMLEEDTKC
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