| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2554 |
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| Symbol | |
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| ID | 6116842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3122180 |
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| End bp | 3124195 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634075 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001760926 |
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| Protein GI | 170726900 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00351574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0265518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGAAT CATCTTTTCA ACTTGAATCA CAATATGTAC CCGCTGGCGA TCAGCCTAAA
GCGATTAAGA AACTAGTAGA TGGCATTGAG TCTGGTTTAG CCTGTCAAAC TCTGTTGGGT
GTGACCGGGT CGGGTAAAAC ATTCACTATT GCTAATGTGA TAAAGGAGAT GTCTAGGCCC
ACGATTATCA TGGCGCCTAA TAAAACCTTG GCGGCACAGC TTTATGGGGA GATGAAGGAG
TTTTTCCCCC ATAACGCGGT CGAGTACTTT GTCTCCTACT ATGACTATTA CCAGCCTGAA
GCGTACGTTC CTTCCACGAA TACCTTTATT GAGAAAGATG CATCGGTCAA TGCCCATATT
GAGCAGATGC GTCTGTCAGC GACTAAAGCT TTGTTAGAGA GAAAAGATGT TGTGCTGATA
GCTTCAGTGT CAGCTATCTA TGGTCTAGGC GACCCAGACT CATATATGAA GATGTTATTG
CACCTAAGGC AGGGCGATAC TATGGGTCAG AGGGATATAT TACATCGGCT TAGTGAGCTG
CAATATACCC GTAATGATAT TGAACTCAAA CGAGGCACTT ACCGTGTTAG AGGGGAAGTG
ATTGATATTT TCGCTGCTGA CTCAGATAGC AATGCGATCC GTGTTGAGCT GTTTGATGAT
GAGATTGAAA GGTTAAGCTT ATTTGACCCT TTAACTGGTC ATATTTTGCA GCGGATCGCA
CGCACGACTG TTTACCCTAA GAGCCACTAC GTAACCCCAA GAGAGAAAAT ATTAGCGGCC
AGCGAAGAGA TTAAAGAGGA GCTTAGGGAG CGGAAGAAGC AACTACTCGA TAACAACAAA
TTGATTGAGG AGCAGCGGAT CACCGAGCGG GTACAATATG ATATTGAGAT GATGGTAGAG
CTTGGTTACT GCTCTGGCAT CGAAAACTAC TCAAGATACC TCTCTGGGCG TGAAGAGGGA
GCTGGGCCGC CAACTCTGCT TGATTATCTA CCTGATGACG GTTTGCTTAT CATTGATGAG
TCCCATGTGA CCGTGCCACA AATTGGGGCT ATGTATAAAG GTGATCGCTC CAGAAAGATG
AACTTGGTTG AGTATGGTTT TCGCTTGCCC TCTGCGTTGG ACAATAGACC CCTTAAATTT
GAAGAGTTTG AAAGTCTGAT GCCCCAAACT ATCTTTGTCT CTGCTACGCC AGCAAATTAT
GAGATAGAGA AGAGTGATGG TGAGATTGCT GAACAGGTGA TTAGGCCGAC TGGTTTGCTA
GACCCTGAGC TTGAAGTCCG TCCCGTGGCG ATTCAGGTTG ATGATCTATT ATCTGAGGTT
AGGAAGAGAG TTAAGGTTCA AGAGCGTGTG TTGGTGACGA CCTTAACTAA GCGCATGTCA
GAGGATCTCA CTGAATACTT AGATGAGCAT GGGGTTAAAG TAAGGTATCT ACACTCAGAT
ATCGATACTG TCGAGCGAGT GGAGATCATC CGCGATCTCA GATTAGGTGT TTTTGATGTA
CTTGTTGGTA TTAACTTGCT TAGAGAGGGA CTTGATCTGC CTGAGGTCTC GTTAGTCTGT
ATTCTTGATG CGGATAAAGA GGGTTTTTTA CGTTCAGAGC GCTCATTAAT ACAGACCATA
GGTCGTGCGG CTCGTAATAT GAATGGTAAA GTTATTCTTT ACGCCGATAA GATCACAGAT
TCGATGGCAA AAGCGATGGG TGAAACTGAA CGTAGGCGTA AGTTGCAACA TCAGTTCAAT
CTCGATAATG GTTTAGTACC AAAAGGCGTT TCTAAGAAGA TCACCGACGT GATGGATGTG
GGTGAGAAAG AGTATGTGCA AAATGATCTT GCTTCGATAA GAGATATTGC CGAATCCAAA
GGCGACTACA AAGTGAATGA TGTGGCGAGC ATTAGCCATC AGATCGATAC GTTAGAGAAA
AAGATGCATG AACATGCTAA AAACCTGGAG TTTGAGCAAG CAGCCGCAGT TCGAGATCAG
GTCAGGCGTC TTCATGATGA GTTGATTAAA GCGTAA
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| Protein sequence | MAESSFQLES QYVPAGDQPK AIKKLVDGIE SGLACQTLLG VTGSGKTFTI ANVIKEMSRP
TIIMAPNKTL AAQLYGEMKE FFPHNAVEYF VSYYDYYQPE AYVPSTNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYMKMLL HLRQGDTMGQ RDILHRLSEL
QYTRNDIELK RGTYRVRGEV IDIFAADSDS NAIRVELFDD EIERLSLFDP LTGHILQRIA
RTTVYPKSHY VTPREKILAA SEEIKEELRE RKKQLLDNNK LIEEQRITER VQYDIEMMVE
LGYCSGIENY SRYLSGREEG AGPPTLLDYL PDDGLLIIDE SHVTVPQIGA MYKGDRSRKM
NLVEYGFRLP SALDNRPLKF EEFESLMPQT IFVSATPANY EIEKSDGEIA EQVIRPTGLL
DPELEVRPVA IQVDDLLSEV RKRVKVQERV LVTTLTKRMS EDLTEYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGVFDV LVGINLLREG LDLPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNMNGK VILYADKITD SMAKAMGETE RRRKLQHQFN LDNGLVPKGV SKKITDVMDV
GEKEYVQNDL ASIRDIAESK GDYKVNDVAS ISHQIDTLEK KMHEHAKNLE FEQAAAVRDQ
VRRLHDELIK A
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