Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2542 |
Symbol | |
ID | 6116826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3108535 |
End bp | 3110811 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641634059 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001760914 |
Protein GI | 170726888 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.204346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTAT TTATACTTGC ACTACTGGTT GTTATTGTGC TGTTTGGTGT CAAAAGTATT AGGATGCAAT TTATTACGCG TCCAATTTTT TCGTTTTTTA AAAAGGTACT TCCTCCGCTT TCAGATACTG AAAAAGAAGC GATGGAAGCG GGTGATGTGT GGTGGGAAGG TGAGTTGTTT AGAGGTAAAC CCAATTGGGA TACTCTGCAT AGCTACGGTA AACCTAAACT AACTGCTGAG GAGCAGGATT TTATTGAAAA TCAAGTGATG ACAGCTCTCA CTTTAATTGA TGATTTTGAT ATTGTACAAA ACCGCAAAGA TTTGCCACCA GAGCTATGGG ATTACTTTAA AAAAGAGGGG TTCTTTGCCC TTATAATACC AAAAGAGTAT GGCGGTAAGG CCTTCTCTGC ATACGCTAGC TCGACGATAG TTGCCAAGCT CGCTAGCCGA AGTGTTAGTG CGGCTGTGAC TGTTATGGTT CCCAACTCTC TAGGACCAGG TGAATTACTG ACACATTATG GTACCAAAGA GCAACGTGAA TATTGGTTAC CAAAACTGGC ATCTGGTGAA GCAGTGCCTT GTTTCGCTCT GACAGGTCCT GAAGCGGGCA GTGATGCAGG CGCAATTCCC GATACCGGTG TTGTCTGTAG AGAGACATTT GAAGGTGAAG AGGTATTGGG ATTAAGGTTG AACTGGGATA AGCGTTATAT CACGTTAGCC CCAGTTTCAA CGGTATTGGG TCTGGCATTT CAGATGGAAG ATCCAGATGG ACTGTTAGGG GATAAGAAGG AGCTCGGAAT TACCTGTGCG CTTATCCCAA CAGATCATGA AGGAGTGGTC ATTGGACAGA GACACAATCC ATTAAACATG GCCTTTATGA ATGGTACAAC TCAAGGTAAG GATGTGTTTA TTCCTCTTGA TTGGATCATT GGTGGGCCTC AGTATGCAGG ACGTGGCTGG CGTATGCTAG TTGAGTGTCT CTCGGCGGGG CGTGGTATCT CACTGCCTGC ACTTTCAACC GCATCGGGTC ACACTGCGAC TAAGACAACA ACGGCATACA GTTATGTCCG TCACCAATTT GGCCTATCTA TCGGTCATTT TGAAGGTGTT CAGGAGGCCC TTGCTCGGAT CATCGCCAAT ACCTATCAGT TGGAGGCTGC AAGACGCCTA ACAACTACGG GGATCGATCT TAAGGTTAAA CCCTCTGTAG TGACTGCTAT TGCCAAATAC CACATGACTG AGATGAGTCG TGATGTGCTT AATGATGCAA TGGATATTCA GTCGGGTAAG GGGATCCAAC TCGGCCCTAA GAACTATTTA GGTCAGCCCT ATATGGCGAA CCCCATCTCT ATTACTGTCG AGGGAGCTAA CATTCTAACT CGCAGCTTGA TGATCTTTGG TCAAGGTGCA ACACGTTGTC ACCCTTATGT GCTCGCTGAG ATGGAAACGG CTGCGATGGA GGATACTTGT GCAGCTTTGG AACGTTTTGA CTCCTTGCTG CTTGGTCACC TTGGTTATGG AGCAAGAAAT GCGTTTAGCT CACTCTTTAG CGCTTTAACT GGAAGTCGCT TTAACCAGTC TCCTGTTAGT GGTGAAACTC AGCAGTACTA CCGCGATATG ACTCGACTAT CATCGGCTTT GGCTTTGATG ACCGATCTCT CGATGTTGAT CATGGGAGGC GATCTTAAGC GAAAAGAGAT GCTTTCAGCG CGTATGGGTG ACGTATTGAG TGAGCTATAT CTAGCATCGG CTACATTAAA GATGTTCGAA GATAATGGTC GTCAACATGA TGATCTGCCC GCGGTACGTT ATGTGATGAT GACTCGTTTG CAAAATGCAG CTAATGCACT TCAAGGGGCG CTACGTAACT TCCCTAATCG TCCTGTTGCC TGGATGATGA GAGCATTGAT CTTCCCGTTA GGTAACCATT TCAATGGACC GAGTGACAAG ATGACCACTG AGCTTGTTAA GGGGATGATG CAACCTGGGC CTGCTCGTGA CCGTTTAACC TTCCTCTGTC CTGATTTTGA ACAGGATAAA GGTGGTATTG CGGAAGTTGA AGCGGCATTT TTGGCGCAAT ATGAGTGCCG TAACATCTAT AAAAAGATAA AAGTGGCTCA GCGTGATGGC ACATTGCCGA AGAAGTTAGC TGGCCTTGAG TTATTTGCCT TAGCAGCAGA GCAGTCCATT ATCACTCAAG ATGAGCTCAA CTCATTGCTT AAAGCCGATG AACTGCGTCT TGCGGCAATT AATGTTGATG ATTTTAAAAG CTTGTAG
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Protein sequence | MTLFILALLV VIVLFGVKSI RMQFITRPIF SFFKKVLPPL SDTEKEAMEA GDVWWEGELF RGKPNWDTLH SYGKPKLTAE EQDFIENQVM TALTLIDDFD IVQNRKDLPP ELWDYFKKEG FFALIIPKEY GGKAFSAYAS STIVAKLASR SVSAAVTVMV PNSLGPGELL THYGTKEQRE YWLPKLASGE AVPCFALTGP EAGSDAGAIP DTGVVCRETF EGEEVLGLRL NWDKRYITLA PVSTVLGLAF QMEDPDGLLG DKKELGITCA LIPTDHEGVV IGQRHNPLNM AFMNGTTQGK DVFIPLDWII GGPQYAGRGW RMLVECLSAG RGISLPALST ASGHTATKTT TAYSYVRHQF GLSIGHFEGV QEALARIIAN TYQLEAARRL TTTGIDLKVK PSVVTAIAKY HMTEMSRDVL NDAMDIQSGK GIQLGPKNYL GQPYMANPIS ITVEGANILT RSLMIFGQGA TRCHPYVLAE METAAMEDTC AALERFDSLL LGHLGYGARN AFSSLFSALT GSRFNQSPVS GETQQYYRDM TRLSSALALM TDLSMLIMGG DLKRKEMLSA RMGDVLSELY LASATLKMFE DNGRQHDDLP AVRYVMMTRL QNAANALQGA LRNFPNRPVA WMMRALIFPL GNHFNGPSDK MTTELVKGMM QPGPARDRLT FLCPDFEQDK GGIAEVEAAF LAQYECRNIY KKIKVAQRDG TLPKKLAGLE LFALAAEQSI ITQDELNSLL KADELRLAAI NVDDFKSL
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