| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2531 |
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| Symbol | |
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| ID | 6116815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3095138 |
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| End bp | 3096181 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641634048 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001760903 |
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| Protein GI | 170726877 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.204125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAG CTAAACATCT TTCTGATATT GAGGTCTCTG CAAAAATTCT TAGGCATGCT
GTACCCAAAA TGTCTGAACT GGATATTCCT GTTACTCCAG ATAACTACTC AGTTTGGTAT
GAGTATTTTT TGGGGGTGAA TTTAGACTTA AATCGTACCA TTGATGAATA TATCTCAAAA
GGTGTGACTT TTACGGCCGA GATAAACAGT GAGCTGGTAA AAAATTATAT TTTAGAGCAA
TCTCCTGAAG TGATAGAAAA TGTCCATGTA GAGACACAAT TGGTGATCAA TAACCTACTG
GAAAAAGTCA CTCAGATGAG TAGTGGTACT GCAAACCTAA CTGAGACATT AAGTGAGTTT
CATCAAGAGC TCAAACAAAC TGTTGATGCC GATGTTTTAT TGAAGTTGGT AAATACATTA
GCCGATGAAA TGGGAAGTGT CATTAGTGAC AATAAGCAGA TGGAGGCAAG TCTCAATACC
ATGAACGAAG AGGTGAGCTC GCTAAAGTCT GAGATGGAAA ACCTGAGTAT TGTGGCGCAA
ACGGATCAGT TAACTTCTCT CTTTAACCGC CGTGCGTTTG AAAAAGAGAT AGAATCGCAC
ATGATACATT ACAAGCAAGA TCACAGCGCA AGCTGTTTGC TTGTGGTCGA TATTGATCAT
TTTAAACTTT TTAATGATAC CCATGGGCAT TTAATTGGTG ACAAGGTGCT CGCCTATGTC
GCTTTAGCTC TTAAGAAAAC AGTCAAGGGA ACGGATTTCG TTGCCAGATA TGGTGGAGAA
GAGTTTGTTG TCTTACTGCC TAATACTGAG TTAAATGATG CTTTAACGGT GGCAGAACTC
GTGCGCCAGA AAATAGCAAA TCAAAAACTC AGCATTGGCA AGGAGGATAA ACACTCCCTT
GGTTCAATTA CGGTTTCTGT TGGTGTTTCT ACCTTGCATA ATTCTGATGA CAGAGAAAGC
TATTTTATTA GAGCCGATGA GGCACTTTAC CGAGCGAAAT CCTCTGGCCG TAACTGTATC
TGTAGTGAGT TGGCTGAATC TTAG
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| Protein sequence | MNLAKHLSDI EVSAKILRHA VPKMSELDIP VTPDNYSVWY EYFLGVNLDL NRTIDEYISK
GVTFTAEINS ELVKNYILEQ SPEVIENVHV ETQLVINNLL EKVTQMSSGT ANLTETLSEF
HQELKQTVDA DVLLKLVNTL ADEMGSVISD NKQMEASLNT MNEEVSSLKS EMENLSIVAQ
TDQLTSLFNR RAFEKEIESH MIHYKQDHSA SCLLVVDIDH FKLFNDTHGH LIGDKVLAYV
ALALKKTVKG TDFVARYGGE EFVVLLPNTE LNDALTVAEL VRQKIANQKL SIGKEDKHSL
GSITVSVGVS TLHNSDDRES YFIRADEALY RAKSSGRNCI CSELAES
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