| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2528 |
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| Symbol | |
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| ID | 6116812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3089487 |
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| End bp | 3090962 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634045 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001760900 |
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| Protein GI | 170726874 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAA TGGAAACAGC GCAGGAAAGT AGTCAGGTAT TAAATGGTAA TCTTCTAGAT
GAGATTTTGG CTCAAACCAA GATAACACCT ATCGATGAAG GCTATGATGT TGCTAAAAAA
GGGGTCGCTG CCTTTATCAG CAATATTCTT GAAACAGAAT CTAACAGCGA GCCTATCAAT
AAAGCGCTTG TTGATAAAAT GCTGGTCGAG TTAGATAAAA AGATTAGTAG TCAGATGGAT
CAAATTCTTC ATGATGAATC TGTTCAACAG ATGGAGTCAT CGTGGAGAAA TTTAAAGTTA
TTAGTTGATA GAACTGACTT TAGAGAAAAT ATAAAGATTG AAGTTCTCCA TGTAACAAAA
AGTGAGTTAC TTGACGATTT TGAGTTTGCA CCGGAAACGG TTCAATCGGG TCTTTACAAG
CACGTATACT CTTCGGGTTA TGGTCAGTTT GGTGGTGAGC CGATAGGGGC TATTGTGGGT
AATTATGCCT TTACGCCATC TTCTCAAGAT ATGAAGCTGT TGCAGTATGT CTCAGCGGTT
GGCGCGATGG CTCATGCACC TTTCTTATCC TCCGTTGGCC CTGAGTTTTT TGGTATTGAT
TCGTTTGAAG AGTTACCGAA TTTAAAAGAT CTAAAATCAA CATTTGAAAG CCCTAAATAC
ACTAAGTGGC GCTCATTAAG AGAGTCTGAA GATGCAAGGT ACTTGGGGCT AACAGCGCCT
AGATTCCTAC TGCGTGTTCC CTATGATCCT ATTGATAACC CAATTGGTTC ATTTAACTAT
CGTGAAAGTG TTCATGCAAG CCACGAAGAT TACCTTTGGG GTAACACAGC ATTTGCTTTA
GCAACACGAT TGACCGAAAG CTTCGCTAAG TACCGCTGGT GCCCAAATAT TATTGGCCCA
CAAAGCGGTG GCGCCGTTGA CGATCTTCCT GTTCATGTCT TTGAATCGAT GGGGGCACTG
CAGTCAAAAA TTCCGACAGA AGTACTCATC ACCGATCGCA AAGAGTTTGA ACTTGCTGAC
GAAGGTTTTA TTAGCCTTAC CATGCGCAAA GGTAGCGACA ATGCAGCGTT TTTCTCAGCT
AACTCAATCC AAAAGCCAAA AGTGTTTCCG AATACCAAAG AGGGCAAGGA GGCTGAGACC
AACTACAAGT TAGGCACTCA GATCCCTTAC ATGATGATTA TCAATCGTCT AGCTCACTAC
ATTAAGGTAT TGCAGCGTGA GCAGATCGGT TCATGGAAAG AGCGTCAAGA TCTTGAGCGA
GAGCTCAATA GTTGGATTAA ACAGTTTGTC GCTGATCAGG AAAATCCACC AGCAGATGTC
AGAAGCCGTA GACCACTACG TGCAGCTAAA GTCGAAGTGA TGGATGTACA GGGCGATCCA
GGATGGTATC AGGTCTCGAT GGCGGTTCGA CCGCACTTCA AATACATGGG AGCTAACTTC
GAACTCTCTT TGGTTGGACG TCTAGACCAG GAGTAA
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| Protein sequence | MESMETAQES SQVLNGNLLD EILAQTKITP IDEGYDVAKK GVAAFISNIL ETESNSEPIN
KALVDKMLVE LDKKISSQMD QILHDESVQQ MESSWRNLKL LVDRTDFREN IKIEVLHVTK
SELLDDFEFA PETVQSGLYK HVYSSGYGQF GGEPIGAIVG NYAFTPSSQD MKLLQYVSAV
GAMAHAPFLS SVGPEFFGID SFEELPNLKD LKSTFESPKY TKWRSLRESE DARYLGLTAP
RFLLRVPYDP IDNPIGSFNY RESVHASHED YLWGNTAFAL ATRLTESFAK YRWCPNIIGP
QSGGAVDDLP VHVFESMGAL QSKIPTEVLI TDRKEFELAD EGFISLTMRK GSDNAAFFSA
NSIQKPKVFP NTKEGKEAET NYKLGTQIPY MMIINRLAHY IKVLQREQIG SWKERQDLER
ELNSWIKQFV ADQENPPADV RSRRPLRAAK VEVMDVQGDP GWYQVSMAVR PHFKYMGANF
ELSLVGRLDQ E
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