| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2491 |
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| Symbol | |
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| ID | 6116766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3037577 |
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| End bp | 3039505 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633999 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001760863 |
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| Protein GI | 170726837 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00112061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000543841 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGTTA TTACACTTCC TGATGGAAGC AAACGTGAGT TTGCTACCCC TGTTTCTACT
TTAGATGTTG CTGCTGATAT CGGACCTGGC CTCGCGAAAG CGTGTATTGC CGGTCGAGTT
AATGGCGAGC TGAAAGATGC TTGCGATATC ATAGACACAG ATTCAGAGTT ATCTATCATC
ACAGCAAAAG ATGAAGAGGG TGTTGAGATC CTTCGTCACT CATGTGCTCA TCTATTAGGC
CATGCATTCA AGCAGTTATG GCCGGAAGCG AAAATGGCAA TTGGTCCAGT AATCGATAAT
GGCTTCTATT ATGATATCGA TCTTGACCAC AAGCTGACCC AGGAAGATAT CGATGCGCTG
GAGAAGCGCA TGGTACAACT TGCTAAGACT AACTATATAG TTGAAAAGCG AGTAGGTAGC
TGGCAAGTCG CCCGTGATAC GTTTGAAGCA CGTGGTGAAA CATACAAGAT GGAAATCTTG
GATGAAAATA TCAGTAAAGA CGATCAACCA GCGCTATATC ACCATGAAGA GTATGTTGAT
ATGTGCCGGG GTCCTCATGT TCCAAACATG AAGTTTTGCC AACACTTTAA GTTAATGAGT
GTTGCTGGTG CCTATTGGCG CGGTAACTCT GACAACAAGA TGCTTCAACG TGTTTATGGT
ACTGCTTGGG CAGATAAGAA AGCACTTAAA GTCCATCTTA ATCGTTTAGA AGAAGCGGCA
AAACGCGATC ATCGTAAGAT AGGTAAACAG CTTGACCTTT ATCATATGCA AGAGGAAGCA
CCTGGTATGG TGTTCTGGCA TAACGATGGT TGGAGCCTGT TCCTTGAACT TGAGAAGTTT
ATTCGTCAAA AGCTAGGTCA ATACACCTAC CAAGAAGTGA AAGGTCCGTT AATGATGGAT
CGCGTACTTT GGGAACGCTC TGGACATTGG GATAAATACT CAGAGGCGAT GTTCACAACT
AACTCTGAAA ATCGTGAATA TGCGATTAAG CCGATGAACT GCCCAGGTCA TGTGCAGATC
TTCAATCAAG GTTTGAAGTC TTACCGTGAT CTGCCACTTC GTATGGCTGA GTTTGGTTGT
TGTCACCGCA ATGAGCCATC GGGTTCATTA CACGGCTTAA TGCGTGTTCG CGGCTTTACT
CAAGATGATG CCCATGTTTT CTGTACTGAA GATCAAGTTC AGCAAGAGGT GAGTGCTTGT
ATTAAGATGG TTTACGATAC TTATGAGACC TTTGGCTTCA AAGATATCGT GGTTAAGCTC
TCTACACGTC CAGAAAAACG CATCGGTGAC GATGATATGT GGGATCGCGC GGAAGAAGCA
CTTAAACAAG CGCTAACAGC GAATGATATC GCCTATGAAA TCTTACCTGG TGAAGGTGCT
TTCTATGGTC CTAAAATTGA ATTTACACTC CATGACTGTC TAGATCGTGC ATGGCAGTGT
GGTACGGTTC AGCTAGATTA CGCACTACCA GGACGTCTTG GTGCAACTTA TGTTGCTGAA
GACAATAGTC GCCAAACTCC AGTGATGATC CACCGTGCAA TATTAGGCTC ATTAGAGCGT
TTCTTAGGCA TTCTAATCGA AGAGTATGCG GGTAAATTCC CTACTTGGTT AGCGCCTATG
CAAGCCGTTG TGATGAATAT TACCGACAAA CAGTCCGATT ATGTCGACGA AGTCGTAAAT
ATTTTAAAAG AAAACGGTAT TCGTGCCTCT AAAGACTTGA GGAATGAGAA GATAGGCTTT
AAGATACGCG AACACACACT AAGGCGTGTA CCTTATTTAT TGGTCGTAGG TGATCAAGAG
ATGGAAAATA AGGAAGTTGC GGTGCGAACC AGAGATGGTG TTGACTTAGG TAAGATTCAA
ATTTCTGAAT TTGCATCTAA GATAAAAGAA CAAATTTCGC TCCGTAGTCT CAATTTGTTG
GAGGAATAG
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| Protein sequence | MPVITLPDGS KREFATPVST LDVAADIGPG LAKACIAGRV NGELKDACDI IDTDSELSII
TAKDEEGVEI LRHSCAHLLG HAFKQLWPEA KMAIGPVIDN GFYYDIDLDH KLTQEDIDAL
EKRMVQLAKT NYIVEKRVGS WQVARDTFEA RGETYKMEIL DENISKDDQP ALYHHEEYVD
MCRGPHVPNM KFCQHFKLMS VAGAYWRGNS DNKMLQRVYG TAWADKKALK VHLNRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSLFLELEKF IRQKLGQYTY QEVKGPLMMD
RVLWERSGHW DKYSEAMFTT NSENREYAIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGSL HGLMRVRGFT QDDAHVFCTE DQVQQEVSAC IKMVYDTYET FGFKDIVVKL
STRPEKRIGD DDMWDRAEEA LKQALTANDI AYEILPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDYALP GRLGATYVAE DNSRQTPVMI HRAILGSLER FLGILIEEYA GKFPTWLAPM
QAVVMNITDK QSDYVDEVVN ILKENGIRAS KDLRNEKIGF KIREHTLRRV PYLLVVGDQE
MENKEVAVRT RDGVDLGKIQ ISEFASKIKE QISLRSLNLL EE
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