Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2479 |
Symbol | |
ID | 6116754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3026202 |
End bp | 3027488 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633987 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001760851 |
Protein GI | 170726825 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00110643 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000482447 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGATC CAAAATTTTT GCGTAATGAA TTAGAGGCAA CGGCGGAAAG CCTAGCCACC CGTGGTTTTA TTCTGGATGT AGAGCGTCTG AGTAAGTTAG AGGAAAAGCG TAAGTCACTT CAGGTGGCTA CCGAAGAGCT ACAGGCTTCC CGTAATGCCA TCTCTAAATC TATTGGACAA GCAAAAGCAA AAGGTGAGGA TGTTGCGCCT ATTATGGCTC AAGTTGGTGA CCTTGGCTCG CAACTTGATT CTAAGAAAGC AGAGCTTGCT GAGCTTCTAG AAGAGCTAAA CGCAATTGCA CTGAGCGTAC CTAATCTACC TGATGCATCT GCACCAATCG GCAAAGATGA GAGCGAGAAT GTTGAAGTTC GCCGCTGGGG CACAATTAAA GAGTACGGCT TTGAGGTTAA AGACCATGTT GAACTTGGTG AAACTTTAGG CGGCTTAGAC TTTAAGTCAG CAGTTAAGAT CACGGGTTCT CGTTTCATTA TCATGAAAGG CCAAATTGCG CGTATGCACA GAGCATTAGC CCAATTTATG CTAGATCTGC ACACGACAGA GCATGGTTAT ACTGAAACTT ATGTTCCTTT ATTAGTCAAC GAAGATAGCT TGATGGGAAC AGGTCAACTA CCAAAATTTG GTGAAGACCT TTTCCACACT AAACCTGCAA CTGAAGAGGG GCAGGGACTG AGCCTTATTC CGACAGCTGA GGTGCCGCTG ACTAATATCG CTCGTGATAC CATCATAGAT GAAGCTGAGC TGCCTGTTAA GCTCACCGCT CATACGCCTT GCTTCAGAAG TGAAGCGGGA TCCTACGGTC GTGATACTCG CGGTCTTATT CGCCAACATC AATTTGATAA GGTTGAGCTT GTCCAGCTAG TGAAGCCTGA AGATTCAATG GCGGCGCTAG ATGCGTTAAC TGGCCACGCC GAAAAGGTAC TTGAGAAACT TGGTCTGCCA TACCGCACCG TTATTCTATG TACCGGTGAT ATGGGTTTTG GTTCAAGTAA AACTTTCGAT ATTGAAGTGT GGTTGCCAGC GCAAAATACA TACAGAGAGA TCTCATCTTG CAGTAATATG CAGGACTTCC AGGCTCGCCG TATGCAAGCG CGTTATAAAG CTGCTGATGC TAAGAAACCA GCTTTACTGC ATACCTTAAA TGGCTCAGGT TTGGCTGTTG GACGTACTTT AGTTGCTGTG CTTGAAAACT ATCAGAATGA AGATGGATCA ATTACAGTAC CAGAGGTTCT TCGCCCATAC ATGGGTGGAT TAGAGAAGAT TGGTTAA
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Protein sequence | MLDPKFLRNE LEATAESLAT RGFILDVERL SKLEEKRKSL QVATEELQAS RNAISKSIGQ AKAKGEDVAP IMAQVGDLGS QLDSKKAELA ELLEELNAIA LSVPNLPDAS APIGKDESEN VEVRRWGTIK EYGFEVKDHV ELGETLGGLD FKSAVKITGS RFIIMKGQIA RMHRALAQFM LDLHTTEHGY TETYVPLLVN EDSLMGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL TNIARDTIID EAELPVKLTA HTPCFRSEAG SYGRDTRGLI RQHQFDKVEL VQLVKPEDSM AALDALTGHA EKVLEKLGLP YRTVILCTGD MGFGSSKTFD IEVWLPAQNT YREISSCSNM QDFQARRMQA RYKAADAKKP ALLHTLNGSG LAVGRTLVAV LENYQNEDGS ITVPEVLRPY MGGLEKIG
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