| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2472 |
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| Symbol | |
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| ID | 6116747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3022332 |
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| End bp | 3023234 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633980 |
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| Product | putative DNA-binding transcriptional regulator |
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| Protein accession | YP_001760844 |
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| Protein GI | 170726818 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000020853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00151008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTCTG AACAATCACT ACAACTTATC GACATGGTCG CTCGTGTTGG TAGTTTCACC
GCCGCAGCCA ATAAACTTCA CAAGGTCCCT TCTGCTGTCA GTTATGCAGT AAAACAGGTT
GAAGATGAAC TTGGCTCCAC ATTATTTGAA CGCCACCACC GAAGTGTTAG TCTGACCCCT
GCGGGAGAAT ATTTCGTCAA ACAAGCTCGT GTTATTTTGA CCAACATGGA ATCGATGAAA
GATGATACCA AGCGCGTTGC CAATGGTTGG CAGCCAACGC TCTCAATAGC ACTGGATAAT
ATCGTCAGAG CCGATAAGAT AAGTGTGCTC ATTGCTGACT TCTATCGACA CTTTACCAAT
GTTGAGTTGA TCATCCGTAT TGAGGTATTT AATGGTGTCT GGGAATCCAT TGCCAATGGG
CGCAGCGATA TTGCTATTGG GGCGACCACA GCCATACCTG TCGGTGGTGA TTACCATTTC
CGTGATATGG GAGAGATTGA GTGGGCTTTC CTGATCAGTA AGCGACACCC CCTTGCAGAG
ATAGATAGAC CATTAACAGA CGATGAGTTA CGACAATATC CCTCTATCTG TCTTGAAGAC
ACCTCCCGAG AGATCCCCAA ACGTATGACC TGGTTACTTG AGAATCAACG TCGCTTAGTG
GTTCCCGATT GGATCAGGGC CATCAACTGT TTCCGAGAAG GCTTAGGGAT CGGCTATATG
CCGATGCACT TTGCAGAGCC CTTTATCCGC TCCGGTGCCC TGCTATCTAA GGAGCTTGAA
CGGCCTAAAG CACCAAGTCC TTGCTGCTTG GCATGGAATG GCGCCAATAT GTCCCCAGCT
ATGGCCTGGG TCTTGGACTA TTTGGGAGAC AGTGAAAAGT TACATAATGA CTGGTTTCTT
TAA
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| Protein sequence | MLSEQSLQLI DMVARVGSFT AAANKLHKVP SAVSYAVKQV EDELGSTLFE RHHRSVSLTP
AGEYFVKQAR VILTNMESMK DDTKRVANGW QPTLSIALDN IVRADKISVL IADFYRHFTN
VELIIRIEVF NGVWESIANG RSDIAIGATT AIPVGGDYHF RDMGEIEWAF LISKRHPLAE
IDRPLTDDEL RQYPSICLED TSREIPKRMT WLLENQRRLV VPDWIRAINC FREGLGIGYM
PMHFAEPFIR SGALLSKELE RPKAPSPCCL AWNGANMSPA MAWVLDYLGD SEKLHNDWFL
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