| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2452 |
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| Symbol | |
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| ID | 6116726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2999287 |
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| End bp | 3000189 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633959 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760824 |
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| Protein GI | 170726798 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAGT TAGAAAATAT GCAGATCTTT ATCAAGGTCG TTGAGACCGG TGGGATCACT
AAGGCTGCAG AGCAGCTCAA CCTCGCTAAG TCGGCAGTCA GTAAGCGGCT ATCAGAGATA
GAGAAGCAGC TAAGCGTCAA GCTCATTAAC CGTACAACCC GTAAATCTAG CCTCACTGAA
GCGGGTAATG CCTACTACCA GAAATGTAAA TTGATCTTAG AGGAGGTCGA CGATCTTAAT
TGTCAAATAT CCTCTGTTCA ACAGAGTTTA AATGGTGCCT TGAAGCTTGC GGTGCCTCTC
TCATTTGGTG TCGTACATTT AGTCAAAGCG TTAGAGCTAT TTGCAAAGCA GCATCCTAGT
TTGCAGATGG ATCTCGATTT TTCAGACCGC TATATCGATC TCGTCGAAGA GGGGTTTGAT
CTTGCCATTC GTATCGGTAC CTTAGCTGAC TCAAGTATGC ACGCTCGCGC CATCGCGCCT
ATCAGTCACA TTTTGTGCGC TAGCCCTGAA TATTTAGCGC TCAACGGCAG TCCCTCAACG
CCTGAGCAGT TAAAAAGTCA CTCACTGCTA CGCTACTCAC GAATGCCGCT CGCAGGCATC
GAGCTTACCG ATAAAGACAA TAAAAAGTTC ACCGTGCCAA TGGAGAGTCA CTGTATCGCC
AACAACGGAG ACTTTTTAAA AGCCATGGCG GTTTCAGGTC ATGGGATCGC TTTTCTACCT
CGCTTTATCG TTTGGCAAGA GCTTGCTAAC GGGACACTTG AATCTGTGAT GCAAAATTAC
CAACTAGCTC AAATGAAAGC TTATGCTGTA TACCCGCAAA ACCGTTACCT GCCCAAGAAG
GTACGTATGT TAATTGACTT TTTAAGTGAG CATTTTGGCG AAACCCCTTA TTGGGAGAAG
TAG
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| Protein sequence | MGQLENMQIF IKVVETGGIT KAAEQLNLAK SAVSKRLSEI EKQLSVKLIN RTTRKSSLTE
AGNAYYQKCK LILEEVDDLN CQISSVQQSL NGALKLAVPL SFGVVHLVKA LELFAKQHPS
LQMDLDFSDR YIDLVEEGFD LAIRIGTLAD SSMHARAIAP ISHILCASPE YLALNGSPST
PEQLKSHSLL RYSRMPLAGI ELTDKDNKKF TVPMESHCIA NNGDFLKAMA VSGHGIAFLP
RFIVWQELAN GTLESVMQNY QLAQMKAYAV YPQNRYLPKK VRMLIDFLSE HFGETPYWEK
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