| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2425 |
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| Symbol | |
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| ID | 6116699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2969823 |
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| End bp | 2971247 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633933 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001760798 |
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| Protein GI | 170726772 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0408104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000966631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCATT CCCAGCCTCA AGGCGCTGAT TACAATTACA CCGTTGTTCG CCAATTTGCA
CTCACGACCG TTTTGTGGGG AATTATTGGT ATGTCAGTCG GTGTATTGAT CGCGGCTCAG
TTAATCTGGC CACAACTAAA CTTCGATACT CCATGGTTAA CTTACAGTCG TCTTAGACCT
CTGCATACAA ATGCCGTGAT TTTCGCGTTT GGTACTTCAG CACTTTTCGC AACATCCTAC
TACATCGTTC AACGTACCTG TCAAACCAAG TTATTTGCAC CTAAAATAGC CGCATTTACC
TTCTGGGGTT GGCAAGCCAT CATTCTGTCT GCAGTGATCA CTCTGCCTCT TGGTATTACA
AGTGGTAAAG AATACGCTGA GCTAGAGTGG CCAATTGATA TCGCAATTAC CTTAGTTTGG
GTATGTTACG CTGTAGTCTT CTTCGGCACG ATAATCAAGC GTACTACATC CCATATTTAT
GTAGCGAATT GGTTCTTTGG TGCCTTCATT ATCACTGTTG CTGTATTGCA CATAGTTAAC
TCTATGGCTG TACCTGTTAG CCTATGGAAG TCTTACTCTC TATATGCTGG TGCAGTTGAT
GCTATGGTGC AGTGGTGGTA CGGACATAAC GCTGTAGGCT TCCTGCTTAC TGCTGGTTTC
TTAGGTATGA TGTACTACTT TGTTCCTAAG CAAGCGGGCC GTCCTGTTTA CTCTTACCGT
CTCTCTATTG TTCACTTCTG GGCATTGATT GCTTTGTATA TTTGGGCTGG TCCTCACCAC
CTTCACTACA CAGCACTTCC AGATTGGACC CAGTCACTTG GTATGGTGAT GTCTCTAATC
CTATTCGCTC CTTCTTGGGG TGGTATGATT AACGGTATCA TGACCCTTTC TGGTGCTTGG
CATAAACTAA GAACTGACCC TGTATTACGT TTCCTTGTTG TTTCATTGTC TTTCTACGGT
ATGTCTACCT TCGAAGGCCC AATGATGGCA ATCAAGACAG TAAACGCACT ATCTCACTAT
ACTGATTGGA CGGTTGGTCA CGTTCACTCT GGTGCGCTAG GTTGGGTTGC TATGGTGTCT
ATTGGTTCTC TTTACCACCT TATCCCGGTT CTATATGGAC ACGGTCGTAT GTACAGCTCA
AATTTGGTTA ATGTCCATTT CTGGCTGGCA ACTATCGGTA CTGTTCTATA TATCGTTTCT
ATGTGGATCT CTGGTGTGAT GCAAGGTCTG ATGTGGCGTG CAGTTAACTC TGACGGTACA
TTGACTTATA GCTTTGTTGA GAGTATCGAA GCTTCATACC CATTCTACTT TGTACGATTC
CTTGGTGGCT GCTTCTTCGT AACCGGTATG TTGATCATGG CATATAACGT GTTCAAGACA
GTTAAAGCAC CTAAAGAGTC TTTGCCTGCA TTAGCAGAAG CATAA
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| Protein sequence | MNHSQPQGAD YNYTVVRQFA LTTVLWGIIG MSVGVLIAAQ LIWPQLNFDT PWLTYSRLRP
LHTNAVIFAF GTSALFATSY YIVQRTCQTK LFAPKIAAFT FWGWQAIILS AVITLPLGIT
SGKEYAELEW PIDIAITLVW VCYAVVFFGT IIKRTTSHIY VANWFFGAFI ITVAVLHIVN
SMAVPVSLWK SYSLYAGAVD AMVQWWYGHN AVGFLLTAGF LGMMYYFVPK QAGRPVYSYR
LSIVHFWALI ALYIWAGPHH LHYTALPDWT QSLGMVMSLI LFAPSWGGMI NGIMTLSGAW
HKLRTDPVLR FLVVSLSFYG MSTFEGPMMA IKTVNALSHY TDWTVGHVHS GALGWVAMVS
IGSLYHLIPV LYGHGRMYSS NLVNVHFWLA TIGTVLYIVS MWISGVMQGL MWRAVNSDGT
LTYSFVESIE ASYPFYFVRF LGGCFFVTGM LIMAYNVFKT VKAPKESLPA LAEA
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