Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2418 |
Symbol | |
ID | 6116692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2964103 |
End bp | 2964795 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633926 |
Product | hypothetical protein |
Protein accession | YP_001760791 |
Protein GI | 170726765 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0165025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000160717 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGATTGATT ACAACATCAC AGGCGCCTTT CTTGTTGGTT TAATGGGCGC TGGTCACTGC ATTGGTATGT GTGGTGGCCT AGTCGGTGCA TTTTCATCTC AACTTGCCAC AACACCGGGA CAAAACCTGC TTGCCTCTAA GTTAAAGTTT CTATTGACCT ATAACTTAGG CCGTATCTTA AGTTACTCGC TTGCGGGTGC ATTAGTAGGT GGCTCCGCGA GTGCATTGGG TATGTTATTT GATATCGATC TTTACCTCAT CACCTTAAGA GTCATAGCCG GTGTGATGAT GATCATTACC GGTTTGTATA TTGCCCAAAT ATGGTCTGGT GTAGTGCAGA TAGAGCGGCT AGGTAAGTTT ATCTGGCGTT TTTTATCCCC TTTAGCTAAT CGTGTTGTGC CCATTAGAAC ACTGCGCCAA GCGTTTGTTG GCGGAGTCTT ATGGGGTTGG CTTCCCTGTG GTCTGGTTTA TAGCACATTA ACTTGGGCTG TTGCCTCACA TTCGGCCCAG CAAGGCGCCT TGATTATGTT GGCATTTGGG CTAGGAACAC TGCCTGCACT ACTGAGTGCG GGCGCAGCAG CAAATATGTT AGGACAATGG GTACAGAAAA GAGCTGTGAG AGTGGTTAGC GGCTTAATAT TAGTCCTATT TGGTTTACAA ACTTTGTACA TTGCAATTGC GCAGCTAAAC TAG
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Protein sequence | MIDYNITGAF LVGLMGAGHC IGMCGGLVGA FSSQLATTPG QNLLASKLKF LLTYNLGRIL SYSLAGALVG GSASALGMLF DIDLYLITLR VIAGVMMIIT GLYIAQIWSG VVQIERLGKF IWRFLSPLAN RVVPIRTLRQ AFVGGVLWGW LPCGLVYSTL TWAVASHSAQ QGALIMLAFG LGTLPALLSA GAAANMLGQW VQKRAVRVVS GLILVLFGLQ TLYIAIAQLN
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