Gene Swoo_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2418 
Symbol 
ID6116692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2964103 
End bp2964795 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID641633926 
Producthypothetical protein 
Protein accessionYP_001760791 
Protein GI170726765 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0165025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000160717 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGATTGATT ACAACATCAC AGGCGCCTTT CTTGTTGGTT TAATGGGCGC TGGTCACTGC 
ATTGGTATGT GTGGTGGCCT AGTCGGTGCA TTTTCATCTC AACTTGCCAC AACACCGGGA
CAAAACCTGC TTGCCTCTAA GTTAAAGTTT CTATTGACCT ATAACTTAGG CCGTATCTTA
AGTTACTCGC TTGCGGGTGC ATTAGTAGGT GGCTCCGCGA GTGCATTGGG TATGTTATTT
GATATCGATC TTTACCTCAT CACCTTAAGA GTCATAGCCG GTGTGATGAT GATCATTACC
GGTTTGTATA TTGCCCAAAT ATGGTCTGGT GTAGTGCAGA TAGAGCGGCT AGGTAAGTTT
ATCTGGCGTT TTTTATCCCC TTTAGCTAAT CGTGTTGTGC CCATTAGAAC ACTGCGCCAA
GCGTTTGTTG GCGGAGTCTT ATGGGGTTGG CTTCCCTGTG GTCTGGTTTA TAGCACATTA
ACTTGGGCTG TTGCCTCACA TTCGGCCCAG CAAGGCGCCT TGATTATGTT GGCATTTGGG
CTAGGAACAC TGCCTGCACT ACTGAGTGCG GGCGCAGCAG CAAATATGTT AGGACAATGG
GTACAGAAAA GAGCTGTGAG AGTGGTTAGC GGCTTAATAT TAGTCCTATT TGGTTTACAA
ACTTTGTACA TTGCAATTGC GCAGCTAAAC TAG
 
Protein sequence
MIDYNITGAF LVGLMGAGHC IGMCGGLVGA FSSQLATTPG QNLLASKLKF LLTYNLGRIL 
SYSLAGALVG GSASALGMLF DIDLYLITLR VIAGVMMIIT GLYIAQIWSG VVQIERLGKF
IWRFLSPLAN RVVPIRTLRQ AFVGGVLWGW LPCGLVYSTL TWAVASHSAQ QGALIMLAFG
LGTLPALLSA GAAANMLGQW VQKRAVRVVS GLILVLFGLQ TLYIAIAQLN