Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2417 |
Symbol | |
ID | 6116691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2963298 |
End bp | 2964047 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633925 |
Product | fumarate/nitrate reduction transcriptional regulator |
Protein accession | YP_001760790 |
Protein GI | 170726764 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0646393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000159166 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGACA ACAATAAAAG TCGTCGTGCA GCTGTTCCAG GATGTGCTAT TCATTGTCAT GATTGCAGTA TGGGGACCTT ATGTATCCCT TTTACCTTAA ATGCTACTGA ACTTGATCGT CTTGACGAAA TCATTGAAAG AAAGAAGCCT ATTCAAAAAG GTGAGCAGAT CTTTAAGTCA GGCGATACAT TAAAGTCTCT TTTTGCTATT CGCTCAGGTA CCATAAAAAG TTTTACAATC ACCGAACAGG GTGATGAGCA GATCACAGGT TTTCATCTCG CCGGTGATGT GATTGGTTTT GATGGTATTC ATGCCCAAGA ACATAAAAGT TTTGCTCAAG CATTAGAAAC CTCAATGGTG TGTGAGATCC CCTTCTCTAC TCTAGATGAT CTCAGCGGCA CTATGCCTAA ACTCAGACAG CAGATCATGC GATTGATGAG TAACGAGATC CAAAGCGACC AGGAGATGAT TCTTCTGCTA AGTAAGAAGA ATGCGGAAGA GAGATTAGCA GCATTTATCA GTAATTTAGC TACTCGTTTT GGCAGCCGAG GATTTTCACC AAAAGAGTTT AGGTTAACCA TGACTCGTGG CGATATCGGC AACTATTTAG GGCTAACCGT AGAAACTATT AGCCGACTAT TAGGTCGCTT TCAAAAAGCT GAGCTAATCG AAGTTAAGGG GAAGTACATT ACCATCGTTA ATTTCGATGC GTTAAATAAA CTTGCCGGTA ACAGCGCCAT CGCTCGTTAA
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Protein sequence | MTDNNKSRRA AVPGCAIHCH DCSMGTLCIP FTLNATELDR LDEIIERKKP IQKGEQIFKS GDTLKSLFAI RSGTIKSFTI TEQGDEQITG FHLAGDVIGF DGIHAQEHKS FAQALETSMV CEIPFSTLDD LSGTMPKLRQ QIMRLMSNEI QSDQEMILLL SKKNAEERLA AFISNLATRF GSRGFSPKEF RLTMTRGDIG NYLGLTVETI SRLLGRFQKA ELIEVKGKYI TIVNFDALNK LAGNSAIAR
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