Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2413 |
Symbol | |
ID | 6116687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2959570 |
End bp | 2960397 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641633921 |
Product | Bax protein, putative |
Protein accession | YP_001760786 |
Protein GI | 170726760 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000013158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACAG GAAGAGTTGG GAAGTTAACA GTATCGGTAA GCATTGTTAT CTTAGCCTTT ATTGTATTAA AGCTTAATTT TATTGATTCA GAAGAGAAAC AGATCGATCA ATTAGGAGCC ATAATAGAAA ACCAGCAGCA TCTGAGTTTA ATCCCTGATT TTGCTTCTAT TCCTCTTGTC ACAGACAAGA AACAAGCATT TTTCGATTAC CTACGTCCTT GGGTTCGACT TCAAAATGGC ATAATTCAAG ATGAACGTTT GTTTTTACAG CGCTCATTGC AGCACCTTAA TGATGGTCTA GCGCTCACAA ATGCTGAATA CTATCGAATT GAGGAGATAG CCAATAAGTA TCAATACTCT TCGCGTGCTT ATAACACGGA AACACTTAAA GAGTTGTTAG TAAGAACAGA TATCATCCCT GAGTCTATGG TGCTAATTCA AGCTGCCAAT GAGACAGGTT GGGGAAGTTC ACGCTTCGCC AGAGAGGGAC TTAACTTCTT TGGTCAGTGG TGCTTCAAAA AAGGTTGTGG TTTGGTACCT CAATCTCGCA CTGCAGGAAT GTCCCATGAG GTTGCTGTTT TCAAATCAGT AGAAGACTCT GTGGCTTCCT ATATGCGCAA CCTGAACTCC AATGCCGCTT ACTCTCTTTT ACGCTCAATT CGCGCCGATA TGCGCGCACA AGATAAAGAA CCCACAGCAG ATGAACTTGT TTATGGGCTA GTAAATTACT CTGAACGTCA GGAAGCTTAT ATTGATGAGC TTTTAGAGAT GTTACGTCAT AACCAGCAGT ACTTGGTAGG AAATAATGAA GAAAAGCCTT CTGTTTAG
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Protein sequence | MKTGRVGKLT VSVSIVILAF IVLKLNFIDS EEKQIDQLGA IIENQQHLSL IPDFASIPLV TDKKQAFFDY LRPWVRLQNG IIQDERLFLQ RSLQHLNDGL ALTNAEYYRI EEIANKYQYS SRAYNTETLK ELLVRTDIIP ESMVLIQAAN ETGWGSSRFA REGLNFFGQW CFKKGCGLVP QSRTAGMSHE VAVFKSVEDS VASYMRNLNS NAAYSLLRSI RADMRAQDKE PTADELVYGL VNYSERQEAY IDELLEMLRH NQQYLVGNNE EKPSV
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