Gene Swoo_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2404 
Symbol 
ID6116678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2946113 
End bp2946637 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content40% 
IMG OID641633912 
Producthypothetical protein 
Protein accessionYP_001760777 
Protein GI170726751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000403861 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00138122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACGG TCATGCCAAG TGAAAAATCA GTTGATGAAC TTGTTAATAG TGAAGTTGAT 
GGCAAACCCA TCGTCATGGT TAATTTATTA AAGTATAGAG ATGAGGCTGA TTATTCTCAT
CTGGATGCTA GCCACCGCGA CTATGGCAAA AAGTTAACCG GTGAAGAAGC TTACTCTGAG
TATGGCAAAG CCGTTGTTAA ATTAGTTTGG AGCGTGGGTG GACAAATATT ATGGTCCGGA
CGTCCGCGCC TATCACTTGT TAGCCCAGAT GAAGAGTCTT GGGATTCGAT TGCTCTGGTT
CAGTATCCAT CCCGCAAAGC CTTCATTGAA ATGGTGGCAT CGGATGAATA TCAAGCAGCG
GTTCACCACA GGACAGCCGC CTTAGAAGAC TCGCGTTTAA TTGAAACGCA AGCGGTAAAA
CTACCAAAAT TAATTCTTAT GGCATTAAGA GCATTTGTAA GATTTAAATC ACTTTTTAAG
TTTAACAAAC AAGAAATTAA CTATCGAAAT TTAAAGAACC TGTAA
 
Protein sequence
MKTVMPSEKS VDELVNSEVD GKPIVMVNLL KYRDEADYSH LDASHRDYGK KLTGEEAYSE 
YGKAVVKLVW SVGGQILWSG RPRLSLVSPD EESWDSIALV QYPSRKAFIE MVASDEYQAA
VHHRTAALED SRLIETQAVK LPKLILMALR AFVRFKSLFK FNKQEINYRN LKNL