| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2386 |
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| Symbol | |
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| ID | 6116657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2926716 |
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| End bp | 2927411 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633892 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001760760 |
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| Protein GI | 170726734 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.927324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAAC ACCTTTTGAT CACAGGTGCA AATCGTGGCA TAGGACTAAC ACTGGTAGAG
CAATATTTGA AAGATGGTTG GGCAGTCAAT GCGTGTTGTC GTCAGCCTGA AAAAGCCGAT
GAGTTAATAC AATTACAAGC CAAGTACGAG TCATTAACAC TCTCAAAACT CGATGTTACT
GATTATCATG CAGTTAAACT GTTAGCTGAC TCTCTTGCCG ATATTCCCAT CGATCTTTTG
ATCAATAACG CGGGTTACTA TGGTCCGAAA GGGGTAAGTT TTGGCGACAC CGATGTCGAA
GAGTGGCGCA GAGTGATAGA GATAAATACC ATTGCGCCTT TAAAAATAGC CGAAGCTTTT
TTACCTCATT TAACACAGGC ACAAGATGCA GCTTATGTGG CCATCTCGTC TAAAATGGGA
AGCATGTCAG ATAATAGCAG CGGCGGAGCC TATATCTACC GTTCATCGAA AGCAGCGTTA
AACAGTGTTG TAAAGAGCCT TTCGCTAGAC CTTAAATCAT ACGGCGTTAA GGTTGTTGCG
CTACATCCTG GCTGGGTTAG AACAGAGATG GGTGGCCCAA ATGGACTCAT AGATACCAAT
GAGTCAGCAG CGGGTTTAAA GCAAGTGATC AGTGAGTTAA GCAGTACTGA TAACGGTGGC
TTTTTTGATT ATCTAGGTAA TAAGATCCCT TGGTGA
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| Protein sequence | MQKHLLITGA NRGIGLTLVE QYLKDGWAVN ACCRQPEKAD ELIQLQAKYE SLTLSKLDVT
DYHAVKLLAD SLADIPIDLL INNAGYYGPK GVSFGDTDVE EWRRVIEINT IAPLKIAEAF
LPHLTQAQDA AYVAISSKMG SMSDNSSGGA YIYRSSKAAL NSVVKSLSLD LKSYGVKVVA
LHPGWVRTEM GGPNGLIDTN ESAAGLKQVI SELSSTDNGG FFDYLGNKIP W
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