Gene Swoo_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2378 
Symbol 
ID6116649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2916553 
End bp2917593 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content44% 
IMG OID641633884 
Productcytochrome-c peroxidase 
Protein accessionYP_001760752 
Protein GI170726726 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0541294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.454259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG CCATTGCTTG TTTAGGCCTA CTCCTCTCAT CTACTTTAGA TGCCATTGAA 
GTAGAGTATT CTGATCATGT TTTTGTCCCT GGCCATCAAA GCTTACAGTA CTGGCTGCTT
CCCTCTCCTG TTCCGACACC CGCAGATAAC CCACAAACAA GTGAGAAAAT AGCACTCGGA
AAAATGCTCT TTTTTGACCC AAGATTGAGT GGTGACAGTA ACATGTCCTG TGCAACTTGC
CATAACCCCA TGTTAGCTTG GTCTGATAGC CAAAGTGTGG CATTAGGATA TAGAAGCCAA
AAATTAACAC GCGCAACCCC ACCGATTATC AATGTTGCCT ACAATCATCT GCAGATGTGG
GATGGCCGAC TACGTACCCT TGAAGAGCAA GCTCTAGCTC CTATGGAGGC ACAACTTGAG
ATGCATGCAA ATCTCGATGA AAAAATAGCA CTTTTGCAAA GTATTGAAGG CTATGTTGAA
GCATTTAGCC TTGCCTTTCC TGATGAAGCC ATTAGTAAAC AAACTATGGC AAAGGCGATA
GCCAGTTTTG AGCGCACAGT GATCAGTGAC AGTTCAAACT TCGATGCTTG GGTGAAAGGA
GATAAAAATG CACTAACAAG AGTTGAGATT GAAGGGTTTA AACTGTTCAT TAATCCACAA
AAAGGCAACT GCTCTGTCTG TCACAGTGCG CCCAACTTTA CTGATGATGG ATTTCATAAC
ATAGGGCTGG CTTCATTTGG TGATAAACAC CCCGATCTAG GTCGATACAA GCAAAGGCCA
CTGAACTTAA TGAAGGGCGC CTTTAAAACG CCAACTTTAA GAGATGTCGC ACTCTCTGCC
CCCTTCTTTC ATGACGGCTC TGCTGCAACA TTAACCCAAG TCGTTAAGCA CTACAGTGAC
GGTGGTGTAG TTAAAACGAA TCTATCCCCT AATTTCAAAG CGAATCAACT CTCAGAAGAT
GAGATCAGCG CTATTGTTGC TTTTCTAAAT GCACTCACAA GCCCACACGA ACCTATACAA
CTACCTAAAC TGCCTCAATA A
 
Protein sequence
MKTAIACLGL LLSSTLDAIE VEYSDHVFVP GHQSLQYWLL PSPVPTPADN PQTSEKIALG 
KMLFFDPRLS GDSNMSCATC HNPMLAWSDS QSVALGYRSQ KLTRATPPII NVAYNHLQMW
DGRLRTLEEQ ALAPMEAQLE MHANLDEKIA LLQSIEGYVE AFSLAFPDEA ISKQTMAKAI
ASFERTVISD SSNFDAWVKG DKNALTRVEI EGFKLFINPQ KGNCSVCHSA PNFTDDGFHN
IGLASFGDKH PDLGRYKQRP LNLMKGAFKT PTLRDVALSA PFFHDGSAAT LTQVVKHYSD
GGVVKTNLSP NFKANQLSED EISAIVAFLN ALTSPHEPIQ LPKLPQ