Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2378 |
Symbol | |
ID | 6116649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2916553 |
End bp | 2917593 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633884 |
Product | cytochrome-c peroxidase |
Protein accession | YP_001760752 |
Protein GI | 170726726 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0541294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.454259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG CCATTGCTTG TTTAGGCCTA CTCCTCTCAT CTACTTTAGA TGCCATTGAA GTAGAGTATT CTGATCATGT TTTTGTCCCT GGCCATCAAA GCTTACAGTA CTGGCTGCTT CCCTCTCCTG TTCCGACACC CGCAGATAAC CCACAAACAA GTGAGAAAAT AGCACTCGGA AAAATGCTCT TTTTTGACCC AAGATTGAGT GGTGACAGTA ACATGTCCTG TGCAACTTGC CATAACCCCA TGTTAGCTTG GTCTGATAGC CAAAGTGTGG CATTAGGATA TAGAAGCCAA AAATTAACAC GCGCAACCCC ACCGATTATC AATGTTGCCT ACAATCATCT GCAGATGTGG GATGGCCGAC TACGTACCCT TGAAGAGCAA GCTCTAGCTC CTATGGAGGC ACAACTTGAG ATGCATGCAA ATCTCGATGA AAAAATAGCA CTTTTGCAAA GTATTGAAGG CTATGTTGAA GCATTTAGCC TTGCCTTTCC TGATGAAGCC ATTAGTAAAC AAACTATGGC AAAGGCGATA GCCAGTTTTG AGCGCACAGT GATCAGTGAC AGTTCAAACT TCGATGCTTG GGTGAAAGGA GATAAAAATG CACTAACAAG AGTTGAGATT GAAGGGTTTA AACTGTTCAT TAATCCACAA AAAGGCAACT GCTCTGTCTG TCACAGTGCG CCCAACTTTA CTGATGATGG ATTTCATAAC ATAGGGCTGG CTTCATTTGG TGATAAACAC CCCGATCTAG GTCGATACAA GCAAAGGCCA CTGAACTTAA TGAAGGGCGC CTTTAAAACG CCAACTTTAA GAGATGTCGC ACTCTCTGCC CCCTTCTTTC ATGACGGCTC TGCTGCAACA TTAACCCAAG TCGTTAAGCA CTACAGTGAC GGTGGTGTAG TTAAAACGAA TCTATCCCCT AATTTCAAAG CGAATCAACT CTCAGAAGAT GAGATCAGCG CTATTGTTGC TTTTCTAAAT GCACTCACAA GCCCACACGA ACCTATACAA CTACCTAAAC TGCCTCAATA A
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Protein sequence | MKTAIACLGL LLSSTLDAIE VEYSDHVFVP GHQSLQYWLL PSPVPTPADN PQTSEKIALG KMLFFDPRLS GDSNMSCATC HNPMLAWSDS QSVALGYRSQ KLTRATPPII NVAYNHLQMW DGRLRTLEEQ ALAPMEAQLE MHANLDEKIA LLQSIEGYVE AFSLAFPDEA ISKQTMAKAI ASFERTVISD SSNFDAWVKG DKNALTRVEI EGFKLFINPQ KGNCSVCHSA PNFTDDGFHN IGLASFGDKH PDLGRYKQRP LNLMKGAFKT PTLRDVALSA PFFHDGSAAT LTQVVKHYSD GGVVKTNLSP NFKANQLSED EISAIVAFLN ALTSPHEPIQ LPKLPQ
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