Gene Swoo_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2368 
Symbol 
ID6116639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2904497 
End bp2905822 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content44% 
IMG OID641633874 
Productamidohydrolase 
Protein accessionYP_001760742 
Protein GI170726716 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGA GTATGAAAAC CACTGAGAAA ATAAGAAAGA TCATCATCAA ACGGTTCCCT 
AAGAGATTGG CTATCACTGC ATTACTCAGC TTAGGTATTC ACATGCCGCT TTTTGCACAA
GATACCTTAT TGATTGCCGA TGGGTATATT GATGTAGTTA AAGGAAAAAC TGTCAAAGAT
GTGGTGATTG TTGTAAGTGG AAATAAGATA ATTAAAGTCA CAGAACAAGA TAAACTCACC
GACAGAACTG CTTATAAAAT CATTGACCTT AGTGGTAAAA CTTTAGTCCC AGGTGTCATG
GATATGCACG TGCACCTTGC AGGCGATGCT GAAGATGACT TCTTGGCTGC ACAAAACTAC
TCGATTCCTC GACAAACAGT TAAAGCGGTT AAAAATGCCA AGCTAACATT ATTAGCAGGT
TTTACTACAG TTCGCGATCT CGGCGCATCA GGCTATACGG TTATCGCGAC TCGTGATGGT
ATCAATGCCG GTGAAATTCC TGGTCCAAGA GTTTGGGCTG TCGGCAATCC AATCAGTATC
ACAGGTGGTC ACTGTGACGA TAACTTCTCA GCCCCTGAGA AGTTATCGAT CGCTGGTGGT
GTCGCCGATG GACCTTGGGC TGTTAGAGCT AAAGTGCGTG AAAACATAAA ATATGGCGCC
AATGCCATTA AGGTCTGTGC AACTGGCGGT GTCTTTTCCA AAGGTACTAA AGTAGGCGTG
CAGCAACTCA CCTATGAGGA GATAAAGGCG GCAGTTGATG AGGCGCATAT GCGTGGTTTA
ACTATTGCAG CTCACGCTCA CGGCACCAGT GGAATAAAAG CATCGATAAA AGCTGGAATA
GACAGTATTG AACACTGCAG CTTTATGGAT AAAGAAGCGA TCAAAATGGC CATCAAGGCT
GGTACCTATC TCTCTTGTGA TATCTACAAT ACCGAGTATA CCCTTGCTTT TGGCGCTGAA
AATGGCGTTC CTGAGGAGAA TATCAATAAA GAGAAACAGG TCTCTAAAGC CCAGAGAGAG
AGCTTTAGAC AAGCGGTTAA AGCGGGAGCT AACATGGTGT TTGGTTCAGA TGCTGCTATC
TATCCCCATG GTGACAATGG CAAGCAGTTC TCTCGTATGG TCACCTTTGG TATGACCCCC
ATTCAAGCTC TTCAAGCGGC AACGATCAAT AGTGCTGCCC TCCTTAAACA AGATAATTTG
GGTCAGATAA AACCAGGGTT TATGGCTGAT ATCATCGCAG TCGATGGTGA TCCGCTAAAA
AATATCAGTT TAATGGAAAA CGTCACCTTT GTGATGAAAG ATGGTCAAGT CTATAAACAG
CAGTAG
 
Protein sequence
MEASMKTTEK IRKIIIKRFP KRLAITALLS LGIHMPLFAQ DTLLIADGYI DVVKGKTVKD 
VVIVVSGNKI IKVTEQDKLT DRTAYKIIDL SGKTLVPGVM DMHVHLAGDA EDDFLAAQNY
SIPRQTVKAV KNAKLTLLAG FTTVRDLGAS GYTVIATRDG INAGEIPGPR VWAVGNPISI
TGGHCDDNFS APEKLSIAGG VADGPWAVRA KVRENIKYGA NAIKVCATGG VFSKGTKVGV
QQLTYEEIKA AVDEAHMRGL TIAAHAHGTS GIKASIKAGI DSIEHCSFMD KEAIKMAIKA
GTYLSCDIYN TEYTLAFGAE NGVPEENINK EKQVSKAQRE SFRQAVKAGA NMVFGSDAAI
YPHGDNGKQF SRMVTFGMTP IQALQAATIN SAALLKQDNL GQIKPGFMAD IIAVDGDPLK
NISLMENVTF VMKDGQVYKQ Q