Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2315 |
Symbol | |
ID | 6116586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2844015 |
End bp | 2844716 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633821 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001760689 |
Protein GI | 170726663 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0273911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000348094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAACA AACCAATTTT AGTCGCCTTA GATTTTGATG ATAAAAACGC TGCTTTGCAA TTAGTCGATA AGCTCGATCC AAACATGTGT CGCTTAAAAG TGGGCAAAGA GATGTTTACT CTTTTTGGGC CACAACTGGT CAAAGACATT CACAGTCGTG GCTTCGATCT CTTTCTTGAT CTAAAATTTC ATGATATTCC AAACACAGTA GCGAAAGCCG TTTCATCGGC AGCTGAGTTA GGTGTTTGGA TGACAAATAT TCATGCTAGT GGTGGTCTTG CCATGATGGA AGCGGCTAAA AAAGCACTCG TTCCATACGG TGACGATGCG CCATTGCTTA TTGCTGTTAC TGTGCTGACT TCGATGAGTG ATGAGGATCT TAAGCTGATC GGGATTGATG TGCCAGCTTT TGAGCATGTT CAACGACTTG CTAAATTAAC GCAAAAAGCC GGCCTCGACG GTGTGGTATG TTCAGCACAT GAAGCTGAGA TATTAAAAGC CTCTTTGGGT GATTCATTTA AGTTAGTCAC ACCGGGTATA CGTCCAGTTG GCGCAGATAA GGGTGATCAG CACAGAATTA TGACACCGCC TCAAGCGATT GCAGCAGGCT CTGATTACTT AGTCATTGGG CGACCTATTA CAAAAGCTGC TGATCCACTT GCAGCGCTAA CGGCAATTCA TCAATCGATT CAAGTGAGTT AA
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Protein sequence | MSNKPILVAL DFDDKNAALQ LVDKLDPNMC RLKVGKEMFT LFGPQLVKDI HSRGFDLFLD LKFHDIPNTV AKAVSSAAEL GVWMTNIHAS GGLAMMEAAK KALVPYGDDA PLLIAVTVLT SMSDEDLKLI GIDVPAFEHV QRLAKLTQKA GLDGVVCSAH EAEILKASLG DSFKLVTPGI RPVGADKGDQ HRIMTPPQAI AAGSDYLVIG RPITKAADPL AALTAIHQSI QVS
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