| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2309 |
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| Symbol | |
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| ID | 6116580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2837738 |
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| End bp | 2839018 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633815 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001760683 |
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| Protein GI | 170726657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00914705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000306905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCAGC TACGTCTCGA GACCATCAAC AAAGTACAGG GTACGGTTAA TATTCCTGGA
TCTAAGAGTA TCTCCAATCG CGCACTCCTC CTTGCAACCT TAGCCAAGGG CACCACGACA
CTAACTAACT TATTAGATTC AGATGACATA CGTTATATGC TGGCATCGCT GAAACAACTG
GGTGTGAATT ACCGTTTGTC AGAGGACAAA ACGGTGTGCG AACTCGATGG ATTGGGTGCA
CCAATCAACT CAAACGTGGC ACAAACACTA TTTCTAGGAA ATGCTGGAAC GGCGATGCGT
CCCTTATGCG CAGCGCTAAC CCTAGGTGAG GGGGAGTTTA TATTAACAGG TGAGCCTCGT
ATGGAGGAGC GTCCTATTGG CGATCTTGTT GATGCCTTAC GCCAACTAGG CGCTGAGGTG
ACCTACCTTA AGAGTGAAGG GTTTCCACCA TTGACCATCA ATGCAACGGG GTTGAATGCC
GGCGACGTTG AAATAGCAGG GGATCTATCT AGTCAGTTTC TCACTGCACT GTTAATGGTG
TCACCACTGG CTAAAGGTGA TGTGAACATT AAGATAAAAG GTGAGCTAGT CTCAAAACCG
TATATCGACA TTACACTCGC GTTGATGGCT CAGTTTGGCG TTAAAGTGAT TAATCATGAT
TATGAGCGTT TTGAGATAAA ATCAGGCCAA AGCTACGTTT CTCCAGGTAA AGTATTAGTT
GAAGGTGATG CATCATCGGC ATCATACTTT CTTGCTGCTG GCGCGATTAA AGGCGGTGAA
GTTAAAGTGA CTGGTGTTGG ACGCCTGAGT ATTCAAGGTG ATGTCAAGTT TGCCGATGTA
CTCGAAAAGA TGGGGGCAGA AATTGAGTGG GGCGATGATT ACATCATATC CCGTGTAGCT
AAACTCAACG CGGTCGACTT GGATATGAAC CACATTCCCG ACGCTGCCAT GACTATTGCT
ACTGCAGCAC TTTTTGCAAC CGGCACCACC CATATTCGCA ATATCTACAA CTGGCGCATT
AAAGAGACTG ACAGACTTGC TGCCATGGCT ACTGAACTTC GAAAAGTAGG GGCGATAGTC
GATGAGGGAC ATGATTACAT TAGTGTAACA CCACCGACTA AACCTCATAC TGCCAATATT
GATACTTATA ACGATCACAG AATGGCCATG TGTTTCTCTA TGCTAGCCTT TGCTGATTGC
GGTATCACAA TTAACGATCC TGACTGCACC TCAAAGACGT TTCCTGATTA CTTTGAACAG
TTTGCAGCAC TAGCCTGTTA A
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| Protein sequence | MKQLRLETIN KVQGTVNIPG SKSISNRALL LATLAKGTTT LTNLLDSDDI RYMLASLKQL
GVNYRLSEDK TVCELDGLGA PINSNVAQTL FLGNAGTAMR PLCAALTLGE GEFILTGEPR
MEERPIGDLV DALRQLGAEV TYLKSEGFPP LTINATGLNA GDVEIAGDLS SQFLTALLMV
SPLAKGDVNI KIKGELVSKP YIDITLALMA QFGVKVINHD YERFEIKSGQ SYVSPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRLS IQGDVKFADV LEKMGAEIEW GDDYIISRVA
KLNAVDLDMN HIPDAAMTIA TAALFATGTT HIRNIYNWRI KETDRLAAMA TELRKVGAIV
DEGHDYISVT PPTKPHTANI DTYNDHRMAM CFSMLAFADC GITINDPDCT SKTFPDYFEQ
FAALAC
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