Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2293 |
Symbol | |
ID | 6116564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2815938 |
End bp | 2817713 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633799 |
Product | hypothetical protein |
Protein accession | YP_001760667 |
Protein GI | 170726641 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000993307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.679763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CAACATTATC ACTGGTGGTT GGATTAGCGC TTACGGGGTT GACTGGGTGC CAGACTCAGG AAAGTACTCA GCAAACAGAT GTAAAAAGTG TGACTCAACA GCAGATGAGC TTTAACCAAT TTTCTCAACA GTTTGTGAGT GACTTCTGGA AAGAGTCTCC CACGTGGGCG CTCTACAGTG GATATCACAA GTATGATGGT ATCTTAAAGA TCCCAAATAA AGAGAATCGT CAGGCATCGA TACTCTTTAA TGAACAACAA CTGGCAAAAT TGGCCCAGTT TGATACAGAT AAACTCTCTG CAAACGAGCT CATAGATTAC CGTTTAATTG AGAATTTGCT TAAGCGTAAC CTATGGGAGA TCACGACCTT TAAGTCTTGG CAGTGGAATC CAAGCGCTTA CAATGTCGCC GGTGGTTTTG CACAGCTGAT TAATGAGGAC TTTGCCCCAT TTGATGCCCG TCTTCGTTCA GTCTTGGCAC GTATGGAAAA TGTTCCAGCC TTTTATGAAG CAGCGCGCCA CAATATCCAT AATCCAACCT TAGAGCATAC TCAATTAGCT CAGATGCAAA ATCAGGGAGC TTTCTCGGTG TTCTCTGAAG ATCTATTAGA TAGCGCCAAA AACTCAGGGC TAACAACTGC AGAGAAAAAA CTGTTTGAAC AGCGGTTTAA TGCATCAACA AAAGCGATAA AAGCTCACAT TGACTGGTTA GCAGCGCTGG CGGCAAAACT TGAAAAAGAG GGCGCGCGTA GTTTCAGAAT TGGTGAAGAG CGCTATGAAG AGAAGTTTGC TTTCGATATT CAAGCGGGCA TGAGTGGTAA AGCTCTCTAT GAGAAAGCCT TAGCAGATAA GCTGCGTGTG CAAACTGAGA TGGCTAAAAT CACCACTCAA CTTTGGTCGA AATACTTCGA TACTCCACAG CCAAAAGATC AGAATAAAGC AACCCGTCAA CTGATAGATA AACTTTCTGC CAAACATGTT AAACGCGAAG ATTTTGTCGA TGAGGTGAGA GCCCAAATAC CTGAGTTGGT TAAGTTCGTT AATGAGAAAA ACTTGGTCAC ACTTAACCCT GAGAAACCAT TGGTCGTACG GGAAACTCCG GCTTATATGC GAGGCTTTGC TGGTGCATCA ATCAGTGCGC CAGGACCTTA TGAGAAGTCG AGTAACACTT ACTACAATGT AACTCCCCTC GATGCCATGG ATGCGGAGTC TGCTGAAAGT TACCTTCGTG AGTACAATCA CTGGATCTTA CAAGTGCTTA ATATCCATGA AGCCATTCCT GGGCACTACA CGCAGCTCGT TTACTCAAAT GAATCACCGA GCATGATCAA GAGCTTGTTT GGTAATGGCG CTATGATTGA AGGCTGGGCA GTCTATACAG AACGTATGAT GCTTGAAGAG GGCTACGGTG ATTTTGAGCC TGAAATGTGG TTAATGTATT ACAAGTGGAA CCTGAGAGTT ATTGCCAATA CGCTACTTGA TTACAGCATT CAGGTTAAAG GGATGACTGA AGAGCAAGCG TTAGACCTGA TGGTGAATGA AGCGTTTCAA CAACAGGCAG AAGCTGAAGG CAAGTGGCGT AGAGCAACAT TGAGCCAAGT TCAGCTTACT AGCTACTATT CAGGCTATCG TGAGATCTAT GATTTCAGAG AGGAGTTGAA GGGGATTGAA GGTGATAATT TTGATCTTAA AACTTTCCAC GAGCAGTTCC TAAGCTATGG CAGCGCGCCG GTTAAGTATG TACGTCAACT TATGTTAGAG AAGTAA
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Protein sequence | MKKATLSLVV GLALTGLTGC QTQESTQQTD VKSVTQQQMS FNQFSQQFVS DFWKESPTWA LYSGYHKYDG ILKIPNKENR QASILFNEQQ LAKLAQFDTD KLSANELIDY RLIENLLKRN LWEITTFKSW QWNPSAYNVA GGFAQLINED FAPFDARLRS VLARMENVPA FYEAARHNIH NPTLEHTQLA QMQNQGAFSV FSEDLLDSAK NSGLTTAEKK LFEQRFNAST KAIKAHIDWL AALAAKLEKE GARSFRIGEE RYEEKFAFDI QAGMSGKALY EKALADKLRV QTEMAKITTQ LWSKYFDTPQ PKDQNKATRQ LIDKLSAKHV KREDFVDEVR AQIPELVKFV NEKNLVTLNP EKPLVVRETP AYMRGFAGAS ISAPGPYEKS SNTYYNVTPL DAMDAESAES YLREYNHWIL QVLNIHEAIP GHYTQLVYSN ESPSMIKSLF GNGAMIEGWA VYTERMMLEE GYGDFEPEMW LMYYKWNLRV IANTLLDYSI QVKGMTEEQA LDLMVNEAFQ QQAEAEGKWR RATLSQVQLT SYYSGYREIY DFREELKGIE GDNFDLKTFH EQFLSYGSAP VKYVRQLMLE K
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