Gene Swoo_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2281 
Symbol 
ID6116551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2798284 
End bp2799351 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content45% 
IMG OID641633788 
Productquinolinate synthetase 
Protein accessionYP_001760657 
Protein GI170726631 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.880932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TAGCCCCAAA AGTTGAACCA ATTCAATACC CTTTTCCACC AAAACCACTT 
CCTTTATCTG AACATGAAAA GTCAGAATAC AAGGCAAAGA TCAAACAACT CCTGATAGAC
AGAGACGCAG TTTTAGTGGC TCACTACTAC ACAGATCCTG AGATCCAGGC GTTAGCGGAA
GAGACGGGTG GTTGTGTTTC TGATTCACTT GAAATGGCGC GATTTGGTCG TGATCATCCA
GCGAAAACCT TAATTGTTGC TGGCGTTAAA TTTATGGGGG AGACCTCTAA AATTTTAAGT
CCAGAGAAAA CAGTATTGAT GCCAACACTC GAGGCGACCT GTTCATTGGA CATTGGTTGC
CCAATTGAAA CCTTTAGCGA GTTTTGCGAT GCGCACCCAG ATCATACTGT TGTTGTGTAC
GCCAATACTT CAGCTGCTGT TAAAGCGCGT GCCGATTGGG TGGTAACCTC AAGTATTGCC
CTTGAGATTG TTGAGCACTT AGACAGTGAA GATAAGAAAA TTATCTGGGG CCCAGATCGT
CATCTGGGTA GCTATATTGC TAAAGAGACT GGCGCTGAAA TGCTAATGTG GCAGGGAGAG
TGCATTGTTC ATGATGAGTT TAAAGCAAAT GCATTGCGAG AGCTTAAAAT ACAGCACCCT
GATGCCGCTA TTTTGGTTCA CCCTGAGTCT CCAGCTAGCG TGGTTGAACT TGCAGATGCA
GTGGGCTCAA CAAGTCAGCT TATTAAAGCT GCTCAAACCA TGGAAAATGA CACCTTTATC
GTGGCTACAG ATAAGGGGAT CTTCTATAAG ATGCAGCAGG CGGCACCAGG AAAAACATTA
ATTGAGGCAC CAACCGGTGG TAATGGGGCA ACGTGTCGAA GTTGTGCTCA CTGTCCTTGG
ATGGCGATGA ATGGTTTACA AGCGATTGAA GCTTCATTAA CGGCTAAAGA TACCCAAGAA
CATGAAATTT TCGTCGATGA TGAGTTGCGA AAGGGGGCTT TGATACCGCT TGATCGTATG
TTGAATTTTG CCCAAACACT AAACATGAAA GTGAAGGGTA ATGCCTAG
 
Protein sequence
MSQLAPKVEP IQYPFPPKPL PLSEHEKSEY KAKIKQLLID RDAVLVAHYY TDPEIQALAE 
ETGGCVSDSL EMARFGRDHP AKTLIVAGVK FMGETSKILS PEKTVLMPTL EATCSLDIGC
PIETFSEFCD AHPDHTVVVY ANTSAAVKAR ADWVVTSSIA LEIVEHLDSE DKKIIWGPDR
HLGSYIAKET GAEMLMWQGE CIVHDEFKAN ALRELKIQHP DAAILVHPES PASVVELADA
VGSTSQLIKA AQTMENDTFI VATDKGIFYK MQQAAPGKTL IEAPTGGNGA TCRSCAHCPW
MAMNGLQAIE ASLTAKDTQE HEIFVDDELR KGALIPLDRM LNFAQTLNMK VKGNA