| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2278 |
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| Symbol | |
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| ID | 6116548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2794387 |
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| End bp | 2795565 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633785 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_001760654 |
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| Protein GI | 170726628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00807475 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACG CAACAAGCCA GAATGAAACT GTCCATCGTG TCAGTTTTCT CGATAGGGAT
TCAGTAAACA TTCCTATTTT AAAAATCTTG CAAGCCGATG GTACCGTGTA TGAAAACGCG
GTATTACCAG CTATTGATGA AGCCCTAGCA CATAAGATTT ACGATACTTG TGTATTTACT
CGGGTATTAG ATGAGCGCAT GTTGGGCGCA CAGCGTCAGG GCCGGATCAG CTTCTATATG
ACCTGTACAG GTGAAGAAGC CTCTATTATC GGCAGTGCAG CATCACTTGA TAATGATGAT
GTTATCTTAG CGCAATATCG TGAACATGCG GCGCTGAGAT ACCGTGGGTT TACCACTGAG
CAGTTTATGA ATCAGCTGTT CAGTAATGAG AAGGATTTGG GTAAAGGCAG ACAGATGCCG
ATCCATTACG GCTCTTCTGA GCTGAACTAC CAAACTATCT CATCACCACT TGCGACCCAG
ATCCCCCAAG CAACTGGCGT AGGTTATAGC CTAAAGATGC AGGGAAAGCG TAATATTGCG
ATCTGCTACT TTGGAGAGGG TGCCGCATCT GAAGGTGATT TTCATGCTGG TCTAAATATG
GCCGCAGTGC TTAAATCTCC GACTATTTTC TTTTGCCGTA ATAATGGTTA TGCGATCTCA
ACACCAACCA GTGAGCAGTT TATGGGTAAC GGTATTGCAA GTCGTGGCCC TGGTTATGGT
ATGCACACGA TACGTGTTGA CGGTAATGAC ATGCTTGCCG TACTTGCTGC AACTCAACAG
GCGAGAGCCT ATGCTGTTGA AAACAATGCG CCAGTACTTA TAGAAGCCAT GACTTATCGA
CTCGGTGCAC ACTCATCTTC GGACGACCCT TCAGGGTATC GCTCAAAAGA TGAGGAAGCT
AAATGGCAAC AACACGATCC AGTTAAACGT TTTAAGCTAT GGATGATCAA CAAAGGTTGG
TTAACCGAGA AACAAGACTC TGAGTTGTTT GAAAAATACC GTAGCGAAGT GCTAGCTGAG
GTGAAGGTGG CAGAGAAGCT TCCTATGTCT AGTGTTGATA CCTTGATTGA AGATGTTTAC
GACACGCCAA CGCCGCGATT AAAGCAGCAG CTAGAGACGC TGAAAACACA TATTAAAAAG
TACCCGAAAT CATATCCAAA TAGCGAAGGG AGTGTATAA
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| Protein sequence | MSNATSQNET VHRVSFLDRD SVNIPILKIL QADGTVYENA VLPAIDEALA HKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEASII GSAASLDNDD VILAQYREHA ALRYRGFTTE
QFMNQLFSNE KDLGKGRQMP IHYGSSELNY QTISSPLATQ IPQATGVGYS LKMQGKRNIA
ICYFGEGAAS EGDFHAGLNM AAVLKSPTIF FCRNNGYAIS TPTSEQFMGN GIASRGPGYG
MHTIRVDGND MLAVLAATQQ ARAYAVENNA PVLIEAMTYR LGAHSSSDDP SGYRSKDEEA
KWQQHDPVKR FKLWMINKGW LTEKQDSELF EKYRSEVLAE VKVAEKLPMS SVDTLIEDVY
DTPTPRLKQQ LETLKTHIKK YPKSYPNSEG SV
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