| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2262 |
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| Symbol | |
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| ID | 6116532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2776331 |
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| End bp | 2777338 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633769 |
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| Product | proline iminopeptidase |
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| Protein accession | YP_001760638 |
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| Protein GI | 170726612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.181325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTAC TGTATCCAGA TATTGAGCCT TATGCAGATC ACCTGCTCTC TATGCCTGCC
AAAAAAGGGG AGGTGGTACA CCAGCTTTAT GTGGAGGAGT GTGGTAATCC AGAGGGAGTG
CCTATTGTTT TCCTCCACGG TGGCCCAGGT TCTGGCTGCC GGGCTTCACA TCGGTGTTAT
TTTAACCCAG AACTTTACCG GATCATCTTG CTCGATCAAC GTGGGTGTGG ACGTTCAAAG
CCCTACGCTT GCCTTGAAAA CAACAACACA GACTATTTAA TTGATGATCT GGAGCAGATA
AGAGATAGGC TTAATATCGA TAAGTGGGTG GTGTTTGGTG GCTCCTGGGG AGCAACGTTA
GCCTTAGTTT ATGCAGAACA TTACCCAGAG CGTGTTCTGG CGATGATTCT ACGTGGCGTG
TTTTTAGGCC GGCAGCAAGA CATTGACTGG GTGTATAGCG ACGGTGGCGC CGCTAACGTG
TTTCCAGAGG CTTGGAAACA GCTTATGTCA GTGTTAACAG ATGATGAGCA ACTTATGCCA
CTAAAGAGCT TGTATGCCTT ACTTGTTGGT ACTGATTATA TTCGCCGCTC ACAGGTGTTG
CAGGCGTTTA ACCAGTGGGA GCAACAGATA GTGACCCTAA GAGAGGAGAG TTTTAGCTTA
ACTGAAGTAC TTGCTGAAAC CCTCCCAGAA GTGATGATTA GCGAGCCCTA CGAAGGCGCC
GCAGCTATTA TTCAGCTCTA CTACAGCCTG AAACTGTGCT TTATTGAACA TAAACCTATA
TTGTCCAGTA TTGATAAAAT AAGACAAATT CCTACTTATA TCGTTCATGG CCGCTATGAC
ATGGTGTGTC CTCTCAGACA AGCTTGGACG CTGTCAAAAG CTTGGCCAGA AGCGCGTCTG
ACTGTATTGC CTTTAGCTGG GCACTCAGCA GGAGAGGCGA GTATGGTCGA TGCGCTGGTG
GAGTTAACGG ATAGTGTTGG CAGTGATTTG AGTGCAAACT CGCTTTAA
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| Protein sequence | MRLLYPDIEP YADHLLSMPA KKGEVVHQLY VEECGNPEGV PIVFLHGGPG SGCRASHRCY
FNPELYRIIL LDQRGCGRSK PYACLENNNT DYLIDDLEQI RDRLNIDKWV VFGGSWGATL
ALVYAEHYPE RVLAMILRGV FLGRQQDIDW VYSDGGAANV FPEAWKQLMS VLTDDEQLMP
LKSLYALLVG TDYIRRSQVL QAFNQWEQQI VTLREESFSL TEVLAETLPE VMISEPYEGA
AAIIQLYYSL KLCFIEHKPI LSSIDKIRQI PTYIVHGRYD MVCPLRQAWT LSKAWPEARL
TVLPLAGHSA GEASMVDALV ELTDSVGSDL SANSL
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