| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2261 |
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| Symbol | |
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| ID | 6116531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2775547 |
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| End bp | 2776329 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633768 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001760637 |
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| Protein GI | 170726611 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCCCT ATTACTACTG CTTAGTTGGC ATCATTAAGC GTGAATTTCT ACGTTTTGTA
CAGCAGCGCA CCCGCTTACT AAGTGCGCTT ATTCGTCCCT TACTTTGGCT AGTCGTGTTT
GCGGCAGGTT TTCGGGCGGC CTTAGGGGTA TCGATAATGG AACCCTATGG CACCTATATC
ACTTATCAGC AATATATCAC CCCTGGACTG TGTTGCATGA TTGTCCTGTT TAATGGCATG
CAGAGCTCAC TCTCTATGGT GTATGACAGA GAGATGGGGA GCATGAAGCT TTTATTGATC
AGTCCGCTGC CAAGACCATT TTTATTGCTT TGTAAGCTGA TAGCCACCGC GATATTGTCA
CTGATTCAGG TCTGTATCTT CCTATTGATA GCTCAGTTTG TGGATGTCGA TACCCCTGTT
TGGGGTTATG TTACTGCGAT ACCGGCTATC TTTTTAATTG CGTTTTTTCT CGGGGCGCTG
GGTTTACTAC TTTCAAACTT AATCAAACAG TTAGAGAATT TTGCTGGTGT AATGAACTTT
GTCATTTTCC CTATGTTCTT TCTTTCAAGC GCGCTGTATC CATTGTGGAA GATGAAAGAA
GCAAGTCTTT GGTTATATTG GATTTGTAAC TATAATCCAT TTAGTTATTG TGTTGAGTTA
TTAAGGTTCG CGCTTTATCA AGAGTTAAAT ATTAGCGCTT TTTTAGTGGT TTTTCTGGCC
ACGATTCTAG TTTCGGTATT GGCTATGTTT AACTTCGCAC CTAAGCGTAC TTTCAGAGGG
TAA
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| Protein sequence | MMPYYYCLVG IIKREFLRFV QQRTRLLSAL IRPLLWLVVF AAGFRAALGV SIMEPYGTYI
TYQQYITPGL CCMIVLFNGM QSSLSMVYDR EMGSMKLLLI SPLPRPFLLL CKLIATAILS
LIQVCIFLLI AQFVDVDTPV WGYVTAIPAI FLIAFFLGAL GLLLSNLIKQ LENFAGVMNF
VIFPMFFLSS ALYPLWKMKE ASLWLYWICN YNPFSYCVEL LRFALYQELN ISAFLVVFLA
TILVSVLAMF NFAPKRTFRG
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