| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2246 |
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| Symbol | |
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| ID | 6116516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2755947 |
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| End bp | 2758511 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633753 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001760622 |
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| Protein GI | 170726596 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00766594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0928411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC AAAGCTTAGC CGAAGAGGTC GCTAGACTTA AACTTCAAAA CAGCAAGTTA
GAGAAGATAA ATCAGGTCCT GATGAAACGT GTTGAGGAGG GAGGCGGCAA TCAAGACGAG
CCCTATGCCG CCTTTGAACA CTCAGTGCAG CTCGCTGAGC AAGTTAAGGA GAAAACCCAA
GCTCTCAATG ATACCTTAGC GCAACTCGAG CGCAGTAACC GAGCACTAAA ACAAGCTAAC
GATCAGGCCA ATATATTTAA ACAACGCTTT ATTGATGCCA TTGAGAGTAT CTCAGATGCC
TTTGTACTAC TCGATAACGA TGGACGGATC ATTCTGCAAA ACAGCCACTT CGTTAATTTC
TGGCAAAAAT CTGGTCTTAA AATTGAGGAA GGCGTCAACC TTAATGACTT TAAAGCTCTC
GCAAAAACGC GCGGTATTAT CTCCCAAGCT TATCCAGGAG ATGCCGACAA TAGCCCCGTC
TATAAACTCT CAGATAATCG CTGGTTCCAA CTGAGTGAAC GCCGAACCCG TGAAGGCGGC
TGGGTGATGC TATACACAGA CATTACAGCA CTGAAAGTCG CAGAGAGCGA GCGTTATGAA
AAAGCGATGG CCCAAAAATC GAAACTACTG CAAAATCTAG TCGATAATCT CTCCCAAGGG
GTTGTACTGA TCAGCAGCCA TGATCAAGTT GAGGTGTGGA ACAAACGCTT TGTTGAGATG
AGCAAACTCT CCACACAAAA GTTACGCTCT ATGCCCTACT TCACTAATCT GCAAAACTCT
ACCGAGCTGG AGCTTGAGCC CAAATCAAAT ACACAAGACG ATCACTATGT TCAGACCCTC
TCTAACGGCT CTGTGATTGA GATCCGAGAT CATCGCTTAA AAAATGGCAA ACTGATCAAA
ACCTTTACCG ATATCACCAC TCGCCATCGA TATGCTGAGT CTTTGAAGAA GAGTGAGAGC
TGGTTAAGGC TAATTACTGA TAACGTGCCT GCTATGATCG CCTATGTGGG CTCAGATCTA
AAATTCCAAT TTACTAACCA GGTCTATGTT GATTGGTATG GCTGGGCGAA AGGTGAGCTC
TATGGTCTTG AACTAGAGCA AAGCCGTATC CATGGGGACT TTATACAACT GCAACCCTAT
GTGGATCGCG CCTTAAAAGG GGAAAGTGTC AGTTTTGAAA TTGAGGAGTT AAATAGTGCA
GGCCAGCCTG CTCACCTGCT TAAATCCTAT GTACCAAACA GAGATAACAC AGGTGCAGTG
CTGGGTTTCT TTGTGCTAGT AAGAGACATT ACAGCAAGAA GAAATAACGC CTTAGCACTG
CAAAAAGCCC ATGACCAACT GGAGCTTAGA GTAAAAGAGC GTACCTCCCA ACTGCAAAAT
TTAAACGATG TACTTCAAGT TGAAGTTGAG GAGCGACGTC AAGCTCAACT GAATTTAACC
GCAGCAAAAA GTGAAGCGGA AATAGCCAAT ATCTCAAAGA CCAAGTTTCT CGCTGCCGTT
AGCCACGACC TGTTACAACC CCTTAATGCT GCACAGCTTT TTACCAGCTC ACTCGCCGAG
CAAGTATCAG ACATAAAATC ATTTTCACTA TTAGGGTCCA TCTCAAGCTC CTTAGACGAT
CTGGAGAACC TTATTAGTAC ACTCGTTGAT ATCTCTAAGC TTGATGCCGG TGTGGTAAAA
GCCGATAAAA GCGCATTTAA CCTTGGCGAA CTCCTTAATA ATCTCGCTAA TGAGTATCAA
CAGATCACTG ACCAATTTGG TGTTGAGCTA CGCCATGTCT CATCTAACGC CGTAGTTCAC
ACTGACAGCG TTTTACTGGC GCGAATACTG CGTAACTTTC TCTCTAACGC CTTTAGGTAT
ACAGATAAAG GCAAAGTCCT GCTGGGTTGT AGACGCCAAG GTAACACGAT AGTAATTCAG
GTATGGGATA ATGGTGCCGG GATTGCTAAA AACCAGCTAA CTGAAATTTT TGAAGAGTTT
AAACGATTAA AGTCATCACA AACGGCCTTC AGTAATGGTT TAGGTTTAGG TTTGGCCATC
GTCGATAAGA TCTCCAAGGT TTTAGGCCAC CCTATCCAAG TACACTCAAC ACAAGGAAAA
GGCTCAGTAT TCTCTGTAAC AGTCCCGATT GGAGAGGTGA TCAGTAACCA CAGAGCCGAT
GATAAACTTA GCCGAGTATT AGCCAATACC GATCTTGCCG AGCGCAAAAT CTGGCTTATC
GATAACGACG CCAGTATATG TGATGCCATG TCTCAACTGC TCAATGGGTG GCAGTGTCAG
GTTATTACTG CAACCAGTCT GGAGAGTCTC AAAGAGAAAG TAGATATCAC GTCTGACAGC
GCAGATATTT TGATTGTCGA TTATCACTTA GATGATGATA TTAATGGTTT AGATGTCGCT
ATCGAGATCA ATCAAAACCG AGAGTTTGAT CTCCCAATAT TAATGATCAC CGCCAACTAC
AGCGAGGAGC TAAAAGCCAA GGCGAAAAAA AGAGGGATCT TACTGCTAAA TAAGCCAGTA
AAACCGATGA AGTTAAAAAC ATCTATCTTA TATTTGCTGA AATAA
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| Protein sequence | MSEQSLAEEV ARLKLQNSKL EKINQVLMKR VEEGGGNQDE PYAAFEHSVQ LAEQVKEKTQ
ALNDTLAQLE RSNRALKQAN DQANIFKQRF IDAIESISDA FVLLDNDGRI ILQNSHFVNF
WQKSGLKIEE GVNLNDFKAL AKTRGIISQA YPGDADNSPV YKLSDNRWFQ LSERRTREGG
WVMLYTDITA LKVAESERYE KAMAQKSKLL QNLVDNLSQG VVLISSHDQV EVWNKRFVEM
SKLSTQKLRS MPYFTNLQNS TELELEPKSN TQDDHYVQTL SNGSVIEIRD HRLKNGKLIK
TFTDITTRHR YAESLKKSES WLRLITDNVP AMIAYVGSDL KFQFTNQVYV DWYGWAKGEL
YGLELEQSRI HGDFIQLQPY VDRALKGESV SFEIEELNSA GQPAHLLKSY VPNRDNTGAV
LGFFVLVRDI TARRNNALAL QKAHDQLELR VKERTSQLQN LNDVLQVEVE ERRQAQLNLT
AAKSEAEIAN ISKTKFLAAV SHDLLQPLNA AQLFTSSLAE QVSDIKSFSL LGSISSSLDD
LENLISTLVD ISKLDAGVVK ADKSAFNLGE LLNNLANEYQ QITDQFGVEL RHVSSNAVVH
TDSVLLARIL RNFLSNAFRY TDKGKVLLGC RRQGNTIVIQ VWDNGAGIAK NQLTEIFEEF
KRLKSSQTAF SNGLGLGLAI VDKISKVLGH PIQVHSTQGK GSVFSVTVPI GEVISNHRAD
DKLSRVLANT DLAERKIWLI DNDASICDAM SQLLNGWQCQ VITATSLESL KEKVDITSDS
ADILIVDYHL DDDINGLDVA IEINQNREFD LPILMITANY SEELKAKAKK RGILLLNKPV
KPMKLKTSIL YLLK
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