Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2236 |
Symbol | |
ID | 6116506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2743601 |
End bp | 2745778 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633743 |
Product | malate synthase G |
Protein accession | YP_001760612 |
Protein GI | 170726586 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.105215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000237571 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACATCAC GAGTGCAGGT TGGCAGTTTA CAGGTGGCAC AAGTGCTATT TGATCTGGTC AATGACAAGA TCCTTCCAGG AACGGAGATC ACCGCGGAGC GCTTTTGGAG TCAGTTAGAA GCGATAGTGA GTGATCTTAC GCCTAAAAAT AGAGCGCTAC TTCAAAAGCG TGATGAGCTA CAAGCTAAGA TAGATGAGTG GCATCTAAAT CAACACTCAA ACCAGCAGCA GTTCGATCTT AATAGCTATA AAGAGTTTTT AACTGAAATA GGTTATCTAG TGAAAGTTGG TCCAGACTTT TCAATAGAGA CAGAGAATGT TGATACTGAA ATAGCAGAAC AAGCTGGTCC TCAGTTAGTT GTGCCTGTTA AAAATGCCAG ATTTGCCCTT AATGCAGCTA ATGCACGTTG GGGAAGTTTG TATGATGCAC TTTATGGCAC TGATGCTATC AGTGAAGAGG GCGGGGCTGA GCTAGGTTCA AGTTATAACC CTGTTCGTGG TGATAAAGTT ATTGCATTTG CAAAGCAACA TTTAGATCAA TTAGCGCCAC TTTCCATAGG TAGCCATAGT GAAGCCCGTC ATTATCAAGT GGCTGGGGGG AAGTTACTTG TGACTTTACT CGATGGCTGC GATACTGGCC TGCAGGAGCC TGAGAAGTTC GTCGGTTTCC AAGGTGACAA GATCTGCCCA TCGGCTGTTC TGCTGAAAAA TAATGGTCTG CATGTGGAGA TCCAGATAGA TAAAGATCAT CGTATTGGTA AACAGGACTC TGCCAATGTT AAAGACCTGC TGGTGGAAGC GGCTGTAACC ACCATTATGG ATTGTGAAGA CTCTGTCGCT GCGGTCGATG CTGAAGATAA GTGTGAAGTG TATGAAAACT GGCTCGGCCT AATGCAAGGT AACCTCAATG CTGAGCTAAA CAAAGGCGGT AAAACGATTA CCCGTGAGCT GAGTCAAGAC AGAGATTACC AAGCACCTTT AGGGGGCAAG TTGACCCTGC CCGGACGTAG CTTACTGTTT GTTCGTAATG TGGGTCACCT GATGACAAAC AACGCGATAC TAGACAAAGA TGGCAAAGAG ATCCCAGAGG GGATTTTAGA TGGCATGGTA ACAGTGCTTG CCGCCATACA TGATCTTCAA GGTCATAATA ATGGTCGTTC AAATAGCCGT GTAGGCTCTG TCAATATTGT GAAACCTAAG ATGCACGGGC CTGAAGAGGT CGCATTTACT TGTGAGCTGT TTACCCGTAT TGAGGATGCC CTTAAGTTGT CTCGAGATAC CATTAAGCTT GGGATCATGG ATGAGGAGCG TCGTACTACC GTGAACCTTA AAGAGTGTAT CCGAGTTGCC AAAGATCGTG TGGTATTTAT CAACACAGGT TTTCTCGATA GAACTGGCGA TGAGATCCAC ACCTCGATGC TGGCAGGGCC ATTTGTGCCT AAATCTATGA TGAAGCAGCA AGCTTGGATC AATGCTTATG AAGATTGGAA TGTCGATATT GGCTTAGCAT GTGGCTTGCC TGGACGTGCT CAGATAGGCA AAGGTATGTG GGCCATGCCA GATGAGATGG CCAAAATGCT TGAGCAGAAG ATTGGGCACC CTAACGCCGG CGCTAACACT GCTTGGGTTC CATCGCCAAA TGGCGCAAGT TTGCACTCAA TTCATTACCA TAGAGTCAAT GTGCTTGAGC GACAAAAAGA GCTAGCTCAA AGAGAGCGGG CAAGTTTGGA TGATATATTA ACGATCCCCT TACTTGAAAA TCCAGCTTCG CTCACCCATG AGGAGGTTGA GAAAGAGCTA GATAACAATG CTCAAGGTAT TTTAGGTTAT GTGGTGCGCT GGATAGATCA AGGTGTGGGC TGCTCTAAAG TGCCAGATAT TAATAATGTT GGATTGATGG AGGATAGGGC GACACTGCGG ATCTCCTCCC AATATATTAC TAACTGGCTT GAGCATAAGA TCTGTACAAA GGAGCAAGTG CTTGCCTCAC TTAAGCGAAT GGCTGTTGTG GTTGATGGTC AAAATAGTGC TGATAATGAA TATCAAGCTA TGGCACCACA ATTCGATGGC ATCGCCTTTA AAGCGGCTTG TGATCTGATT TTTGAAGGTA AGGAGCAGCC ATCTGGCTAT ACAGAGCCTT TGCTACACGC ATACCGAATC GAGGCTAAAG CGAGCTAA
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Protein sequence | MTSRVQVGSL QVAQVLFDLV NDKILPGTEI TAERFWSQLE AIVSDLTPKN RALLQKRDEL QAKIDEWHLN QHSNQQQFDL NSYKEFLTEI GYLVKVGPDF SIETENVDTE IAEQAGPQLV VPVKNARFAL NAANARWGSL YDALYGTDAI SEEGGAELGS SYNPVRGDKV IAFAKQHLDQ LAPLSIGSHS EARHYQVAGG KLLVTLLDGC DTGLQEPEKF VGFQGDKICP SAVLLKNNGL HVEIQIDKDH RIGKQDSANV KDLLVEAAVT TIMDCEDSVA AVDAEDKCEV YENWLGLMQG NLNAELNKGG KTITRELSQD RDYQAPLGGK LTLPGRSLLF VRNVGHLMTN NAILDKDGKE IPEGILDGMV TVLAAIHDLQ GHNNGRSNSR VGSVNIVKPK MHGPEEVAFT CELFTRIEDA LKLSRDTIKL GIMDEERRTT VNLKECIRVA KDRVVFINTG FLDRTGDEIH TSMLAGPFVP KSMMKQQAWI NAYEDWNVDI GLACGLPGRA QIGKGMWAMP DEMAKMLEQK IGHPNAGANT AWVPSPNGAS LHSIHYHRVN VLERQKELAQ RERASLDDIL TIPLLENPAS LTHEEVEKEL DNNAQGILGY VVRWIDQGVG CSKVPDINNV GLMEDRATLR ISSQYITNWL EHKICTKEQV LASLKRMAVV VDGQNSADNE YQAMAPQFDG IAFKAACDLI FEGKEQPSGY TEPLLHAYRI EAKAS
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