| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2234 |
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| Symbol | |
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| ID | 6116504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2740713 |
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| End bp | 2742296 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633741 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001760610 |
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| Protein GI | 170726584 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0305365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000429136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAAATT ACAGAGCAGA TATCGACAGC GCTACAACAT TAGTTGAGAA AGAAGGTAGC
GCATGGAATG CAATTAATCC TGAGTCAGTA GCTCGTATGC GAGCTCAGAA CCAGTTTAAG
ACGGGTTTAG ACATAGCTAA GTACACTGCT AAAATCATGC GTGAAGATAT GGCAAATTAT
GATGCCGATA GCTCGCAATA CACTCAGTCT TTAGGTTGCT GGCATGGCTT TATCGGCCAG
CAAAAGATGA TCTCTATTAA GAAGCATCTG TTAACCACTA AGCGCCGTTA TCTTTATCTA
TCAGGTTGGA TGGTTGCTGC ACTGCGTAGT GAGTTTGGAC CGCTACCTGA TCAGTCTATG
CATGAGAAGA CATCGGTTGC CAGTTTAATC GCCGAACTAT ATACCTTCCT ACGCCAAGCT
GACGCCCGTG AGCTAGGTGG CCTGTTCCGC GAGCTTGATA AAGCTCAAGG CGCAGAGAAA
GATGCAGTAC AAGCTAAGAT AGATAACTTC GAAACACATG TCGTACCAAT TATTGCCGAT
ATCGATGCAG GTTTCGGTAA CGAAGAAGCC ACCTATTTAA TGGCTAAACA GATGATTGAA
GCTGGTGCAT GTTGTATTCA ACTTGAAAAC CAGGTTTCTG ATGTTAAGCA GTGTGGTCAC
CAAGATGGTA AAGTGACTGT TCCACATGTT GAGTTTTTAG CTAAAATCAA TGCAGTTCGT
TATGCCTTCC TTGAGCTAGG TATCGATGAT GGTGTTATCG TTGCCCGTAC TGACTCACTA
GGTGCAGGAC TTACACAGAA AATTGCAGTA ACTGCTGAGC CAGGTGATTT AGGTGATAAG
TACAACTCTT TCCTTGAAGT TGAAGAGGTG GCTACTGATA ACCTTAACAA TGGTGATGTT
GTCTTTAAGC GCGGTGACAA GTTAGTTAAA CCATCACGCC TTCCAAACGG CCTATTCAAG
TTCAGAGCTG GTACAGGTGA AGAGCGCTGT GTATTAGATT GTATCACTAG CTTACAAAAT
GGTGCCGATC TGCTTTGGAT TGAAACAGAG AAGCCACATG TTGCCCAGAT TGGCGGTATG
GTTAACGCTA TTCGTAAAGT TATCCCGAAT GCTAAGCTTG TGTACAACAA CTCTCCATCG
TTCAACTGGA CACTTAACTT CCGTCAGCAG ATCTTCGATG CAATGAGTGA AGCAGGCCAA
GATGTATCAG CCTATAACCG TGCTGATTTG ATGAATATCG ATTACGATGG TACTGAGCTG
GCTGTTCAAG CTGACGAGAA GATCCGTACT TTCCAAGCCG ATGCTGCACG TGAGGCGGGG
ATTTTCCATC ACCTAATCAC ACTGCCGACA TACCACACGG CTGCGCTGTC TACCGATAAC
TTAGCTAAAG AGTACTTCGG TGATCAAGGC ATGCTAGGTT ATGTTGCTAA TGTTCAACGT
AAGGAGATCC GTCAAGGTAT CGCCTGTGTT AAGCACCAAA ACATGGCAGG TTCTGATATG
GGTGATGACC ACAAGGAGTA CTTCTCTGGA GATCAAGCGC TTAAAGCTTC TGGTAAAGAC
AACACAATGA ACCAATTTGG CTAA
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| Protein sequence | MSNYRADIDS ATTLVEKEGS AWNAINPESV ARMRAQNQFK TGLDIAKYTA KIMREDMANY
DADSSQYTQS LGCWHGFIGQ QKMISIKKHL LTTKRRYLYL SGWMVAALRS EFGPLPDQSM
HEKTSVASLI AELYTFLRQA DARELGGLFR ELDKAQGAEK DAVQAKIDNF ETHVVPIIAD
IDAGFGNEEA TYLMAKQMIE AGACCIQLEN QVSDVKQCGH QDGKVTVPHV EFLAKINAVR
YAFLELGIDD GVIVARTDSL GAGLTQKIAV TAEPGDLGDK YNSFLEVEEV ATDNLNNGDV
VFKRGDKLVK PSRLPNGLFK FRAGTGEERC VLDCITSLQN GADLLWIETE KPHVAQIGGM
VNAIRKVIPN AKLVYNNSPS FNWTLNFRQQ IFDAMSEAGQ DVSAYNRADL MNIDYDGTEL
AVQADEKIRT FQADAAREAG IFHHLITLPT YHTAALSTDN LAKEYFGDQG MLGYVANVQR
KEIRQGIACV KHQNMAGSDM GDDHKEYFSG DQALKASGKD NTMNQFG
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