| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2207 |
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| Symbol | |
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| ID | 6116477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2705283 |
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| End bp | 2707178 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633715 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001760584 |
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| Protein GI | 170726558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.247913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000287119 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAACA AGCTGACATT TGGCATATTT TTTACCGCCT CCTTGCTATT AACCTCTGGG
GCAGATGCCG TATCACTTCA GTCCCACTTA AAAATTGAGC CTATTTCATG GTGGGCAGGC
ATGCACAACC CTAGATTGCA GTTGATGCTC CATGGAGACA AGATTGGCTC GTTAAAGGTA
GATATTGAGG GAGATGACGT CACAATATTG GAGACAAAGC GCACTGACAA TCCAAATTAT
CTTTTTATTA CCCTGAACTT AGCTGATGCA AAGGCCCAAA CATTAGCGTT AAGCCTCTTA
GATGACCAGA AGGTTAAATA CAGGTTTAAC TACTCATTGC ATGAGCGAGC CAAGGGTTCT
GCCATGCGTC AGGGCTTTAG CAATAAGGAT GTGATCTACC TGATCACTCC AGACAGATTC
GTCAATGGCG ATCTAAGTAA TGACAATCAA ATTGAGATGC TTGAACAGAT AGATCGAAAT
GATAAAGATG GCCGCCATGG CGGTGATATT CAAGGCATTG AGAACAGTTT AGATTACTTG
GAAAAGTTAG GTGTTACTCA ACTGTGGATC AATCCACTGC TTGAAAATAA TCAGCAAAAA
TACTCCTATC ACGGTTACTC AACCACAGAT CACTACCGCA TCGATCCTAG GTTTGGCAGT
AATGAAACAT ACAAAGAGCT GGTCAAAAAG GCCAATGACA AAGGCATAGG GATCATTCAA
GATATTATCG TCAACCATAT CGGCTCAAAC CATTGGTGGA TGCAAGATCT CCCCAGTTCA
ACCTGGATAA ACGGTATCCA TACAAGCCAA GATAAGCAGC CAATAAACTA TACCAGCCAC
AGACGAACCA CAGTGCAAGA CCCCTACGCT GTAAGCGAAG ACCATAGCGA GTTTGTCGAT
GGCTGGTTTG TCGATACGAT GCCTGATCTC AATCAAACTG ACCCTTTACT TGCCACTTAC
CTTATCCAGA ACAGTATATG GTGGGTTGAA TATGCCAACT TAAGCGGTAT ACGTGAAGAC
ACTTACTCTT ATGCCGATAA AGCATTTTTA AGTGATTGGT CCAAGGCTAT CATGACTGAA
TATCCTAACT TTAATATCGT TGGCGAAGAG TGGACTGCTA ACCCCATTAC AGTCTCCTAC
TGGCAAGCGG GTAAAGTTAA TCGAGACGGC TACATCTCTT ATCTTCCGAG TTTAATGGAT
TTCCCTCTCT ACGAGGTGAT GCTTAAAGCG CTGACACAAG CCGAAAGTTG GGACAAAGGC
TTTATCTCCC TCTACGAGAT GATGGCTAAT GATGTGATTT ATGCCAACCC AAGCAATTTA
GTTCTTTTTG AGGGCAACCA TGATACCAAT CGACTCTATA GCTTAATGAA TGAAGATCTT
AATCTCTTTA AGATGGCCAT GACCTACACA CTCACCTCAA ACCGTATACC TCAACTCTTT
TATGGCACAG AGGTGTTAAT GACCAGCCCT AAAGAGGGAC GTCATGATGG TGAAGTCCGT
AGTGACTTTC CCGGTGGTTG GCCAACAGAC AAAATCAATG CATTAACAGG TAGAGGGCTA
ACAGAGAAAC AGCGTGAAGC TCAAGGTTTT GTTAAAACCC TACTGAACTT TCGAAAAAAC
TCTGCTGCGA TCCATAAAGG TTCACTTAAA CACTACGTGC CAATAGACGG GGTTTATGTC
TATTTCCGCT CCTTTAACGA TGAAACTCTC ATGGTTGTCA TGAACAAAAA TGACAAACCA
GTGCAACTGA CAAGCAAACG ATTTAAAGCC CAGTTAGATG GGTTTAACAG AGCAACTGAA
ATACTGACAG ACACCCAGAT AGCGATTAGC TCAGCAGAGG GGGCCAGCAT CACAGTCCCC
ACGCGCGGCG TACTGTTACT ATCACTCACA GATTAA
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| Protein sequence | MLNKLTFGIF FTASLLLTSG ADAVSLQSHL KIEPISWWAG MHNPRLQLML HGDKIGSLKV
DIEGDDVTIL ETKRTDNPNY LFITLNLADA KAQTLALSLL DDQKVKYRFN YSLHERAKGS
AMRQGFSNKD VIYLITPDRF VNGDLSNDNQ IEMLEQIDRN DKDGRHGGDI QGIENSLDYL
EKLGVTQLWI NPLLENNQQK YSYHGYSTTD HYRIDPRFGS NETYKELVKK ANDKGIGIIQ
DIIVNHIGSN HWWMQDLPSS TWINGIHTSQ DKQPINYTSH RRTTVQDPYA VSEDHSEFVD
GWFVDTMPDL NQTDPLLATY LIQNSIWWVE YANLSGIRED TYSYADKAFL SDWSKAIMTE
YPNFNIVGEE WTANPITVSY WQAGKVNRDG YISYLPSLMD FPLYEVMLKA LTQAESWDKG
FISLYEMMAN DVIYANPSNL VLFEGNHDTN RLYSLMNEDL NLFKMAMTYT LTSNRIPQLF
YGTEVLMTSP KEGRHDGEVR SDFPGGWPTD KINALTGRGL TEKQREAQGF VKTLLNFRKN
SAAIHKGSLK HYVPIDGVYV YFRSFNDETL MVVMNKNDKP VQLTSKRFKA QLDGFNRATE
ILTDTQIAIS SAEGASITVP TRGVLLLSLT D
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